Gene Information

Name : vgrG-2 (VC0395_0115)
Accession : YP_001214956.1
Strain :
Genome accession: NC_009456
Putative virulence/resistance : Unknown
Product : vgrG protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3501
EC number : -
Position : 130209 - 132293 bp
Length : 2085 bp
Strand : -
Note : identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646

DNA sequence :
ATGGCGACATTAGCGTACAGCATTGAGGTGGAAGGGCTGGAAGATGAGACTCTGGTGGTCAGAGGCTTTCACGGGCAGGA
GCCACTCTCCAACAGTGTTTTTTTAGGGCAAGCCTGTTACGGGTTTCGCTACGAAGTGCAACTGGCGAGTCGGGTATCCA
ATCTGACTGCTGAGCAGATGGTGGATAAGCGTGCTGAGCTCAAGATTTACCGCAATTCACAGTTGGTGCAGCGCGTGCAC
GGCATTGTACGTGCTTTCAGCCAAGGCGATATCGGCCATCATCACACCTTCTACGAACTCACTTTAGTGCCTGCCTTAGA
GCGCTTATCCCTGCGCCACAATAGCCGCATTTTCCAAAAGCAGACTGTTCCAGAAATTCTCTCTATCTTGCTGCAAGAGA
TGGGCATCCACGATTACGCTTTTGCGCTCAAACGTGATTGCGTGCAGCGTGAGTTTTGTGTGCAGTACCGTGAAAGTGAT
ATCGACTTTCTGCACCGCCTCGCCGCTGAAGAAGGCTTGGTGTACAGCTTTGTCCATGAAGCGGGCAAACATACCCTCTA
TTTCAGTGATGCTAGTGACAGCCTAAGTAAACTGCCGGAGCCCATCCCGTACAACGCCTTAGCGGGCGGCACGATGGATA
CACCGTACATCCACGGCTTAACCTATCGCACCCAAGCGGAAGTGAGCGAAGTTCAGCTCAAAGATTACAGCTTCAAAAAG
CCGACGTACTCGTTTTTACAAACCGTGCAGGGTACTGAGCTGGATTATCAGCAAACGCGCTACCAACATTTTGATGCGCC
GGGGCGCTACAAAGACGATGTGAACGGCGCCGCCTTTAGCCAAATCCGTTTAGACTACCTGCGCCGCCATGCCCACACCG
CAACAGGGCAGAGCAACGAGCCGCTGCTGCGTGCCGGCTATAAGTTTGACCTGCAAGAGCATCTTGACCCTGCGATGAAC
CGCGATTGGGTGGTGGTCTCTATTAACCATCAAGGTGAGCAGCCGCAAGCGTTACAAGAAGAGGGCGGCAGTGGTGCAAC
GACCTACAACAACCAGTTCAGCTTAATTCCAGGGCATCTCCACTGGCGCGCCGAGCCACAACCCAAACCGCAAGTCGATG
GTCCAATGATAGCCACGGTCGTCGGTCCTGAAGGCGAAGAAATCTTCTGTGATGAACACGGGCGGGTGAAAATCCATTTT
CCGTGGGACCGCTACTCGAACGGTAACGAGCAAAGCTCCTGTTGGGTACGGGTGTCGCAAGGTTGGGCGGGCAGTCAGTA
TGGCTTTATCGCTATTCCGCGCATCGGTCATGAAGTGATTGTTTCTTTCTTAAATGGCGACCCAGACCAACCGATTATCA
CTGGCCGCACCTATCATGCGACCAATACGCCGCCATACACTTTGCCAGAGCACAAAACCAAAACCGTGCTGCGCACCGAG
ACGCACCAAGGGGAAGGGTTTAACGAGCTCAGTTTTGAAGACCAAGCGGGCAAAGAGCAAATCTACCTGCATGCGCAGAA
AGACTTCGATGGTTTGATTGAAAACGACCACACCACGGTCATTCGCCACGACCAACACCTGACCGTTGAAAACGACCAGT
TCACTCAGATTAAGCACAACCAACACCTGACGGTCGAGGGGGAGAGTCGTACGCTCGTCAAACTCGACTGCAGCAGCGAA
ATCGGCGGTTCATTGCAGCAAAAAATCGGCAGCAAAGCGATTTACGATGCAGGCACAGAGGTTCACCTTAAAGCGGGTAA
CAAACTGGTCTTGGAAGCAGGCAACGAGCTTACCATCAAAGCCGGCGGCAGTTTTATTAAAGTCGATGCTGGCGGTGTGC
ACGTCGTCGGCTCTGCTATTAACCTCAACTCCGGCGGCAGCGCAGGCAGCGGCTCAGGCTATGGCGGTAAAATGGCCGAG
TTGCCACAAGGGGTGGATAAAGCCAAAACGCCGCAAGAGATTGAGCTAGCCGCGGTAACTCCCACTCAGCAGTCTATGTC
GCCTTTACTTAAGGCGCGACAAATTGAAGCACTCAAAGGTCCTGCACCTGTGTGTGAAGTGTGTGAAGAGGCCAAGGGAA
ATTAA

Protein sequence :
MATLAYSIEVEGLEDETLVVRGFHGQEPLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDKRAELKIYRNSQLVQRVH
GIVRAFSQGDIGHHHTFYELTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGIHDYAFALKRDCVQREFCVQYRESD
IDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSLSKLPEPIPYNALAGGTMDTPYIHGLTYRTQAEVSEVQLKDYSFKK
PTYSFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFDLQEHLDPAMN
RDWVVVSINHQGEQPQALQEEGGSGATTYNNQFSLIPGHLHWRAEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHF
PWDRYSNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGHEVIVSFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTE
THQGEGFNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDQHLTVENDQFTQIKHNQHLTVEGESRTLVKLDCSSE
IGGSLQQKIGSKAIYDAGTEVHLKAGNKLVLEAGNELTIKAGGSFIKVDAGGVHVVGSAINLNSGGSAGSGSGYGGKMAE
LPQGVDKAKTPQEIELAAVTPTQQSMSPLLKARQIEALKGPAPVCEVCEEAKGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vgrG AAN64196.1 VgrG Not tested macrophage toxin pathogenicity island Protein 2e-124 41