Gene Information

Name : VC0395_0306 (VC0395_0306)
Accession : YP_001215147.1
Strain :
Genome accession: NC_009456
Putative virulence/resistance : Unknown
Product : cold shock domain-contain protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 338758 - 338970 bp
Length : 213 bp
Strand : -
Note : identified by match to protein family HMM PF00313

DNA sequence :
ATGTCTACTAAAATGACTGGTTCTGTAAAATGGTTCAACGAAACTAAAGGTTTCGGTTTTCTTACTCAAGACAATGGTGG
CAACGATGTGTTTGTTCACTTTAACTCTATTCAGTCAGAAGGTTTCAAAACCTTAGCTGAAGGTCAACGTGTTAGCTTTA
TCGTTGAACAAGGTAAGAAAGGCCCTCAAGCGTCTAACGTAGTCGCGCTGTAA

Protein sequence :
MSTKMTGSVKWFNETKGFGFLTQDNGGNDVFVHFNSIQSEGFKTLAEGQRVSFIVEQGKKGPQASNVVAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-18 63
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 8e-06 42