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Name : ccmF (VC0395_A1640) Accession : YP_001217579.1 Strain : Genome accession: NC_009457 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1761608 - 1763563 bp Length : 1956 bp Strand : - Note : identified by match to protein family HMM PF01578; match to protein family HMM TIGR00353 DNA sequence : ATGATTGCTGAAATTGGCCACTTTGCACTGATTGTATCGCTCAGCTTAGCGATATTACTCAGTGTGCTGCCATTAGTTGG GGCGTCACGCAACAACACACTATTGATGAACACGGCTCGCCCTTTGGCATGGGGTATGTTCTTTTTGCTGTCGATCTCGT TTGCGGTTTTGCTGTGGGCATTCTATATCAATGATTTTACAGTGCAATATGTGGCAAGTAACTCCAATAGTGAGCTGCCT TGGTACTATCGCCTCACTGCTGTATGGGGCGCGCATGAAGGTTCATTACTGCTTTGGGTGCTTATCCAAGCGGCTTGGAC TGTGGCTGTCGCGAGTTTTAGCCGCGGTATGCCACAAGAATCGGTAGCGCGTGTGCTTGCGGTGATGGGGATGATTACTG TTGGGTTCTTACTCTTCATCATTCTAACGTCTAACCCGTTTTTACGCACCTTGCCTTATTTTCCGATTGACGGCCGTGAT TTAAATCCGCTGCTGCAAGACCCCGGGTTAATCATTCACCCGCCTATGTTGTACATGGGATATGTGGGATTCTCCGTGGC CTTCTCGTTTGCGATTGCTTCTTTGATGACAGGCCGTCTCGACACGGCATGGGCACGTTGGTCACGACCTTGGACAACGG CCGCTTGGCTCTTTTTGACGCTGGGTATCGTACTGGGTTCATGGTGGGCTTACTACGAACTTGGCTGGGGCGGTTGGTGG TTCTGGGATCCAGTGGAAAACGCCTCTTTCATGCCTTGGCTTGCCGGAACAGCGCTGATGCACTCATTAGCGGTGACTGA AAAACGCGGCACGTTCAAAGCGTGGACGGTACTGCTGGCGATTTCTGCATTCTCGTTGAGCCTATTGGGCACCTTCTTAG TGCGCTCAGGCATCTTGGTTTCGGTGCATGCTTTCGCCTCCGATCCGGCGCGCGGTATGTTCATTCTCGGCTTCTTGATT GCGGTGATTGGTGGTTCACTACTGCTATTTGCGATCAAAGGCGCTTCAGTACGAGTGCGTGGTAATTTTGAGCTGGTATC TCGTGAAAACAGCTTGTTGGTAAACAACGTGCTGCTGATGACCGCACTCGCGGTGGTACTGATTGGTACCTTGTTGCCTT TAGTGCACAAACAACTGGGTCTTGGTTCCGTCTCTATCGGTGCGCCTTTCTTTAACATGCTGTTTGCCTGGTTGATGATT CCTTTTGCATTTTTTATGGGAATTGGTCCACTGATCCGCTGGAAGCGCGATCAAATCTCCACACTCTTTAAACCTATGCT CATCACAGCGATGGCATCGTTAGTATTGGCAGCGTTGATGATGTGGCTGAATGCTCCGACGTTTAGCCCAATGGCTTATC TTGGTTGGGTCATGGCGTGGTGGATCTTACTGTTACACGCTTATGAACTGCACACGCGAGCGACTCATCGTCACCGCTTC ATAGTTGGGGTGAAGAAACTGCAACGTAGCCACTGGGCGATGATGCTTGGTCATGTTGGTTTAGCGGTGAGCATCATTGG TATTGCTATGGTGCAAAACTACAGCATTGAACGTGATGTGCGTTTGGCTCCGGGAGATAACTTCCAACTCAATGAGTACA ACTTTTACTTCCAAGGTGTGCGTGATAAAGATGGACCGAACTACGATGGCTACATTGCTGATTTTGAAATCACTAGCCAA GGCCAATATGTCAATACATTGCATGCCGAGAAACGTTTCTATCGCACCGCAAAGTCAATGATGACCGAAGCGGCGATCGA CCGTGGCATTACGCGTGACCTTTACATTGCGATGGGTGAGCGTTTGGATGATAACCGCTCTTGGGCTGTGCGTATTTATT ACAAACCTTATGTGCGCTGGATTTGGGCAGGCGGCTTGCTGATGGCCATCGGTGGTGCCTTAGCCATCAGTGACAAGCGT TACCGCTTTAGAAAAAACGCACATCAGGAGGCTTAA Protein sequence : MIAEIGHFALIVSLSLAILLSVLPLVGASRNNTLLMNTARPLAWGMFFLLSISFAVLLWAFYINDFTVQYVASNSNSELP WYYRLTAVWGAHEGSLLLWVLIQAAWTVAVASFSRGMPQESVARVLAVMGMITVGFLLFIILTSNPFLRTLPYFPIDGRD LNPLLQDPGLIIHPPMLYMGYVGFSVAFSFAIASLMTGRLDTAWARWSRPWTTAAWLFLTLGIVLGSWWAYYELGWGGWW FWDPVENASFMPWLAGTALMHSLAVTEKRGTFKAWTVLLAISAFSLSLLGTFLVRSGILVSVHAFASDPARGMFILGFLI AVIGGSLLLFAIKGASVRVRGNFELVSRENSLLVNNVLLMTALAVVLIGTLLPLVHKQLGLGSVSIGAPFFNMLFAWLMI PFAFFMGIGPLIRWKRDQISTLFKPMLITAMASLVLAALMMWLNAPTFSPMAYLGWVMAWWILLLHAYELHTRATHRHRF IVGVKKLQRSHWAMMLGHVGLAVSIIGIAMVQNYSIERDVRLAPGDNFQLNEYNFYFQGVRDKDGPNYDGYIADFEITSQ GQYVNTLHAEKRFYRTAKSMMTEAAIDRGITRDLYIAMGERLDDNRSWAVRIYYKPYVRWIWAGGLLMAIGGALAISDKR YRFRKNAHQEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-156 | 62 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 7e-133 | 54 |
