Gene Information

Name : cspD (VC0395_A0712)
Accession : YP_001216662.1
Strain :
Genome accession: NC_009457
Putative virulence/resistance : Unknown
Product : cold shock-like protein CspD
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 736579 - 736809 bp
Length : 231 bp
Strand : -
Note : identified by match to protein family HMM PF00313; match to protein family HMM TIGR02381

DNA sequence :
ATGTATAGCATGGCTACAGGTACAGTGAAATGGTTTAATAATGCCAAAGGCTTCGGTTTTATTTGCCCGGAAGGTGAAGA
CGGAGATATTTTCGCTCATTACTCAACCATTCAGATGGACGGATACCGTACACTCAAAGCCGGTCAACAGGTTTCTTATC
AGGTGGAGCAAGGTCCTAAGGGATACCACGCGAGCTGTGTTGTGCCAATCGAGGGACAATCAGCAAAATAG

Protein sequence :
MYSMATGTVKWFNNAKGFGFICPEGEDGDIFAHYSTIQMDGYRTLKAGQQVSYQVEQGPKGYHASCVVPIEGQSAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-14 50