Gene Information

Name : RCIX2315 (RCIX2315)
Accession : YP_686740.1
Strain : Methanocella arvoryzae MRE50
Genome accession: NC_009464
Putative virulence/resistance : Virulence
Product : ABC-type transport system, ATPase component
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 824257 - 824946 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGAACGTTCAGGCGGCCGGGGGCGAAGTCGTACTGGAGGCCAGGGGCCTCAAAAAGTCCTATCGCATGGGCAAAGTGAC
GGTAGAGGCGCTCCGCGGTGTAGACCTCGCCATCAGGCGAGGGGAGTTCGTCTCCATTATCGGGCCTTCAGGCTCGGGCA
AGTCGACACTCCTGAACCTGATCGGCTGCCTGGATCAGCCTACGGCCGGCCAGGCCATTATCGACGGGCAGGACGTCTCC
CGCATGAAGGACCCGGCGCTGACCGCAGTCAGGTGCAGGAAGATCGGTTACGTGTTCCAGAAATTCTACCTGCTGCCCTT
CCTCACCACGCTGGAGAACGTGGAGCTGCAGGCCCGGCTGGCCGGCGTCAAAGATAGCCGGGCCAGGTCGGTAGAGGCCT
TGAAGCTGGTCGGGCTTGAGGCCCGGATGAACCACCGCCCGGTCGAGATGTCGGGCGGCGAGCAGCAGAGAGTGGCCATC
GCCCGGGCACTCGTAAAGGGTCCGGCCTTACTGCTGGCCGACGAGCCTACCGGCAACCTGGATACGAAGACCGGGGACTT
GATCATGGACGTGTTCAAGCGCCTCAATAAGCAGGGGCTCACCATTGTCATGGTCACCCATAACCCAGAGCTGGCAGCCC
GGACGGGCCGGGTCATCAAGGTCAGGGACGGACTGATCGAGGAAGCCTGA

Protein sequence : 
MNVQAAGGEVVLEARGLKKSYRMGKVTVEALRGVDLAIRRGEFVSIIGPSGSGKSTLLNLIGCLDQPTAGQAIIDGQDVS
RMKDPALTAVRCRKIGYVFQKFYLLPFLTTLENVELQARLAGVKDSRARSVEALKLVGLEARMNHRPVEMSGGEQQRVAI
ARALVKGPALLLADEPTGNLDTKTGDLIMDVFKRLNKQGLTIVMVTHNPELAARTGRVIKVRDGLIEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-29 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RCIX2315 YP_686740.1 ABC-type transport system, ATPase component NC_012469.1.7686878. Protein 6e-49 53
RCIX2315 YP_686740.1 ABC-type transport system, ATPase component NC_008702.1.4606598. Protein 3e-40 48
RCIX2315 YP_686740.1 ABC-type transport system, ATPase component CP001581.1.gene598.p Protein 8e-42 45
RCIX2315 YP_686740.1 ABC-type transport system, ATPase component CP001581.1.gene798.p Protein 1e-41 44
RCIX2315 YP_686740.1 ABC-type transport system, ATPase component NC_012469.1.7685735. Protein 9e-33 42
RCIX2315 YP_686740.1 ABC-type transport system, ATPase component NC_012469.1.7686946. Protein 1e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RCIX2315 YP_686740.1 ABC-type transport system, ATPase component VFG0869 Protein 1e-22 41