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Name : CMM_1949 (CMM_1949) Accession : YP_001222691.1 Strain : Clavibacter michiganensis NCPPB 382 Genome accession: NC_009480 Putative virulence/resistance : Unknown Product : putative MFS permease Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 2200532 - 2202031 bp Length : 1500 bp Strand : + Note : putative shikimate MFS permease (ZP_00186986.1| COG0477: Permeases of the major facilitator superfamily [Rubrobacter xylanophilus DSM 9941]; NP_625306.1| putative integral membrane transport protein [Streptomyces coelicolor A3(2)]; NP_756685.1| Shikimate DNA sequence : ATGACCACCGCACCGCCCGCCGCATCCGCCGCATCCGCCGCGTCGACCACCCCGCCGCCCGCAGCGCCCTCCGCGCCTGA AGCCCCCGAGGCGCCCGCCGACGTGTCCCGCCGCCGACGCCGCGTGCTCACCGCGTCGTTCATCGGCACCACCGTCGAGT ACTACGACTTCTACCTCTACGCCACCGCGTCCGCGCTCGTGTTCGGCAGCCAGTTCTTCCCGAACCAGACGCCCGCGGTC GGCCTCCTCTCGTCGTTCGCCGCGTACGGCGTGGGGTTCCTCGCGCGCCCCATCGGCGGGATCGTCGCCGGGCACCTCGG CGACCGGATCGGCCGGAAGCGCATGCTCGTCTACTCGCTCGTGCTGATGGGGATCGCGTCGACGCTCATCGGCGTCCTGC CGACCTACGCGACCATCGGCCTCGCGAGCGTCGTCGGCCTCGTGCTCCTGCGGCTCGTGCAGGGCATCGCGGCGGGCGCA GAGTGGGGCGGATCCGCGCTGCTGTCGGTCGAGCACGCCCCCGCCCACCGCCGTGGCCTGTTCGGCGCGTTCACGCAGAT GGGATCCGCGGGCGGCATGCTCCTCGCGACCGGCGTCTTCGCGGCGACCCGCTTCGGCCTCGGCGAGGAGCGGTTCCTCG CCTGGGGCTGGCGCCTGCCGTTCCTGCTCAGCGCCGTGCTCGTCGCGGTGGGCCTCGTGATCCGCCTCCGCGTGGAGGAC GCCGCCGAGTTCCGCGACATCAAGGCGGCCGGTGAGGTCGAGCGCTTCCCGCTCGGCGTCGTGCTGCGGAGGCACCCGCG CGCCGTGTTCATCACGGCGGGCCTCCGCCTCGTGCAGCCCGCGCTGTACTCGATCCTCACCGTCTACACGCTCTCCTACC TCGCCGAGAAGCGGGGCGACTCGGGCAGCGCGCTCACGGCGGTGCTCATCGTGTCGGCCTTGAGCGTGCTCACCACTCCC CTCTGGGGCTGGATCTCCGACCGCGTCGGCCGCCGCCGCCTCACCATCGCGAGCGCCGCCGGCATCGGGATCCTCATCTG GCCGTTCTTCGCGTTCCTCGACTCCGGCCCGCTGCTGCTCCTGCCGCTCGTCTTCGCGCTCGGCATGAACGTGTTCCACG ACTCGATCTACGGGCCGCAGGCCGCGTGGTTCGCCGAGCAGTTCCCGACGGGCGTCCGCTACAGCGGCGTCTCGCTCGGC TACCAGGTCGGCAGCATCTTCTCCGTCGGGCTCACGCCGCTGCTCGCGGTGCTGTTCCTGCAGTGGGGCGGCGGATCCCC GTGGATCCTCTGCGCCTACATCGGCCTGTACGCCGTGCTGACGATCGCGGCGGCGCTCGCCGCGGAGGACCCGGCGCGCG AGGCGATCGCGGCGCGGCGCGCAGCCGCCGAGCGGACCTCGGACGGCGCCGGCAGGGAGGTCGTGCACCCCGCGGTCGCC GTCGCCGGACCGGCGGCCGCCGCGGACAGCCGCGAGCGCGAGCGCGCGACGGCCCGCTAG Protein sequence : MTTAPPAASAASAASTTPPPAAPSAPEAPEAPADVSRRRRRVLTASFIGTTVEYYDFYLYATASALVFGSQFFPNQTPAV GLLSSFAAYGVGFLARPIGGIVAGHLGDRIGRKRMLVYSLVLMGIASTLIGVLPTYATIGLASVVGLVLLRLVQGIAAGA EWGGSALLSVEHAPAHRRGLFGAFTQMGSAGGMLLATGVFAATRFGLGEERFLAWGWRLPFLLSAVLVAVGLVIRLRVED AAEFRDIKAAGEVERFPLGVVLRRHPRAVFITAGLRLVQPALYSILTVYTLSYLAEKRGDSGSALTAVLIVSALSVLTTP LWGWISDRVGRRRLTIASAAGIGILIWPFFAFLDSGPLLLLPLVFALGMNVFHDSIYGPQAAWFAEQFPTGVRYSGVSLG YQVGSIFSVGLTPLLAVLFLQWGGGSPWILCAYIGLYAVLTIAAALAAEDPAREAIAARRAAAERTSDGAGREVVHPAVA VAGPAAAADSRERERATAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 5e-59 | 43 |
