Gene Information

Name : SynWH7803_2466 (SynWH7803_2466)
Accession : YP_001226189.1
Strain : Synechococcus sp. WH 7803
Genome accession: NC_009481
Putative virulence/resistance : Virulence
Product : multidrug ABC transporter ATPase and permease
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 2294927 - 2297566 bp
Length : 2640 bp
Strand : +
Note : -

DNA sequence :
ATGCAAGGCGACGCTGCCGTTGCCGCCAGCTGCCGTCATCACCTCTGGGAAGCGGAGCTCGCTGCTCTGCTGCAGAGCTT
GCTGAACCAGTCCCCCAAGCAATCCCGCCCCCTCAGCAGCTGGCTGCGTGAACTGCTGCCATTGGCCCACATCCTCGAGG
CCTCCGATCGCGCAGCGGTGCAATCAGCACTGAGCGCGCAGAAGCGCCTGTTCCTCTCCAGCAGCCCAGAGAATCCAGAT
CTCGCTGCCAGCGGCGATGAACTGCGGGACGCTGACGCGATCGCAGCCCTTCCAGCGGACCGCCACGGCTGGCCCCTGCG
CCTGATTGCCCTTCCAGCAACAGCGTTGCAGGACCTTGAGGCCGATGCTGCAGCTGACGATGTGCTCGAAGCGGAGGTGG
TCAGTCCATCCCCAGGCAGCGCCCTGAGCCGAAGCGACATCCCCCAGGCTCCCCTGCGCCCGCCGGTCAGCCGCTTCAAT
CAACCAGGCACGGACAACCGCGATTTCTTCGTGGCGGGCGAGGGGGTGGTGGAGGAGACCCTGGCCTGTTTCCAGATGCT
CACGAAGCTGATGAAGCTTCCGTTCCGGCGTGATGCCATCGAGCGGGTGCTGCGCGATCAGCTGCGCCGGGGACAAACCC
CCACCCTCAGGCTTTGCGGACAGATCGCTGCAGGGCTGGGGCTGCATGTCTCTGGCGCCAAGGTGGCCGCTCGGATGGGA
CTGCGCCTGCAAACTCCCACCCTGGTGCCCTGGGGTGACGCGTTTGCCCTCGCTGTTCGCAGCGATCAACGCGGACTGGT
GCTCGCTTCCCCCAGCCAGGGATTCGTGGAACTGGATGCCGAGCAACTCGACACCGCATTCCCCGAAGGCATCGATTTGC
TGCTGCTGGATCGCACCAGCACCACACCGGAGCAGACCTTCGGCCCGTCCTGGTTCTGGCCAGCCCTGAAGCGCTACCGC
GGAGTGCTGATCCAGGTGTTGACCGCCAGCTTCGTGGTGCAGCTGTTCACCCTGGCCAACCCACTGCTGATTCAGGTGAT
CATCGACAAGGTGATCTCTCAACGCAGCCTGGACACCCTGCAGGTGCTGGGCTTTGCCCTGGTGGCCGTCACCCTGCTGG
AGGGGGTTCTCGGCAGTTTGAAAACCTATCTGTTCTCAGAAACCACCAATCGCATCGACCAGCGACTGGGTGCGGAGGTG
ATCGACCACCTGTTACGCCTTCCCCTCGGCTATTTCGACCGGCGCCCGGTGGGTGAGCTCGGGTCGCGGATCAGTGAGCT
GGAGAAGATCCGCAACTTCCTCACCGGCCAGGCCCTCACCACCGTTCTGGATGCAGCGTTCTCGCTGATCTACATCGTGG
TGATGCTGATTTACAGCTGGCTTCTCACCCTGATCGCCCTGGCGGTTCTGCCCATCCAGGTGGGACTCACCTTGCTGGGA
GCCCCACTGTTCCGGCGCCAGTACCGCAAGGCCGCCGAGGCCAACGCCTCCACCCAAAGCCATTTGGTTGAGGTGCTCAC
CGGAATCCAAACGGTGAAAAGTCAGAACGTGGAAATGATCAGCCGCTGGACCTGGCAGGAGCGCTACGGCAAGTACATCA
GCCGCAGTTTCGAAAAGACCATTACCGGCACGGCCCTGAGCCAGACCTCCCAGGTGCTCCAGAAGATCTCCCAGCTGCTT
GTGCTGTGGGTGGGCGCCACCCTGGTGCTGTCTGGCGATCTCACCCTTGGTCAGCTGATCGCCTTCCGCATCATCTCCGG
CTACGTCACCCAACCACTGCTGCGCCTGTCCTCGATCTGGCAAACGATCCAGGAACTGCGGGTGAGTTTTGAGCGCCTGG
CGGATGTGATCGACACCCCTCAGGAATCAGACGATCAGGACAAAGCCAAGGTGCCCCTGCCGCCGATCGAGGGCGCCGTG
AGCTTCGACAACCTCTCGTTCGGCTTCAGTCCCGGCACACCACCGGTGCTCCACGACGTTTCCTTGCAGATCAAAGCCGG
CACCTTCGTGGGGATCGTGGGACAGAGCGGCAGCGGCAAAAGCACCCTGATGAAGTTGCTTCCGCGGCTGTATTCACCGG
ACCAGGGCCGCATCCTGATCGACGGCTATGACATCGACAAAGTGGAGCTGTATTCGCTGCGTCGTCAGATCGGCATCGTT
CCCCAGGATCCCCTGTTGTTCTCAGGCAACGTGAACGAGAACATCGCCCTGACCCAACCGGATGCCTCCAGTGAAGAGAT
CGTGCTGGCCGCAAAAGTGGCCTGTGCCCACGATTTCATCATGGAACTGCCTGCCGGTTACAGCACACCGGTGGGCGAGC
GGGGCGCCTCCCTCAGCGGTGGCCAACGCCAGCGGATTGCCATCGCCCGAACCCTGCTGGCCAATCCCAAGCTGCTGGTG
ATGGACGAAGCCACCAGCGCCCTCGACTACGAAACCGAACGCAAGGTGTGCGACAACCTGATCCAGGCCCTGCACGATTG
CACCGTTTTCTTCATCACCCACCGTCTGTCCACCGTGCGCCGGGCCGACCTGATTGTGGTGATGCACCAAGGAGCCGTGG
TGGAACAGGGAACTCACGATGAATTGATGGACCGTCGCGGTCGTTACTACGCCCTTTATCGCCAGCAGGAGGCCAGCTGA

Protein sequence :
MQGDAAVAASCRHHLWEAELAALLQSLLNQSPKQSRPLSSWLRELLPLAHILEASDRAAVQSALSAQKRLFLSSSPENPD
LAASGDELRDADAIAALPADRHGWPLRLIALPATALQDLEADAAADDVLEAEVVSPSPGSALSRSDIPQAPLRPPVSRFN
QPGTDNRDFFVAGEGVVEETLACFQMLTKLMKLPFRRDAIERVLRDQLRRGQTPTLRLCGQIAAGLGLHVSGAKVAARMG
LRLQTPTLVPWGDAFALAVRSDQRGLVLASPSQGFVELDAEQLDTAFPEGIDLLLLDRTSTTPEQTFGPSWFWPALKRYR
GVLIQVLTASFVVQLFTLANPLLIQVIIDKVISQRSLDTLQVLGFALVAVTLLEGVLGSLKTYLFSETTNRIDQRLGAEV
IDHLLRLPLGYFDRRPVGELGSRISELEKIRNFLTGQALTTVLDAAFSLIYIVVMLIYSWLLTLIALAVLPIQVGLTLLG
APLFRRQYRKAAEANASTQSHLVEVLTGIQTVKSQNVEMISRWTWQERYGKYISRSFEKTITGTALSQTSQVLQKISQLL
VLWVGATLVLSGDLTLGQLIAFRIISGYVTQPLLRLSSIWQTIQELRVSFERLADVIDTPQESDDQDKAKVPLPPIEGAV
SFDNLSFGFSPGTPPVLHDVSLQIKAGTFVGIVGQSGSGKSTLMKLLPRLYSPDQGRILIDGYDIDKVELYSLRRQIGIV
PQDPLLFSGNVNENIALTQPDASSEEIVLAAKVACAHDFIMELPAGYSTPVGERGASLSGGQRQRIAIARTLLANPKLLV
MDEATSALDYETERKVCDNLIQALHDCTVFFITHRLSTVRRADLIVVMHQGAVVEQGTHDELMDRRGRYYALYRQQEAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 7e-125 44
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 6e-125 44
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 6e-125 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SynWH7803_2466 YP_001226189.1 multidrug ABC transporter ATPase and permease VFG1557 Protein 4e-125 44
SynWH7803_2466 YP_001226189.1 multidrug ABC transporter ATPase and permease VFG1501 Protein 4e-125 44
SynWH7803_2466 YP_001226189.1 multidrug ABC transporter ATPase and permease VFG0907 Protein 3e-125 44
SynWH7803_2466 YP_001226189.1 multidrug ABC transporter ATPase and permease VFG0841 Protein 7e-119 44