Gene Information

Name : csoS1/ccmK1 (SynWH7803_0677)
Accession : YP_001224400.1
Strain : Synechococcus sp. WH 7803
Genome accession: NC_009481
Putative virulence/resistance : Virulence
Product : carboxysome shell peptide
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 674177 - 674488 bp
Length : 312 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTAACGAAACCATGGGCATCGCTCTCGGCATGATCGAGACCCGCGGCCTCGTCCCCGCGATCGAAGCTGCTGACGC
CATGACCAAGGCCGCCGAAGTGCGCCTGATCGGTCGTGAGTTCGTCGGTGGCGGTTACGTCACCGTGCTCGTGCGCGGCG
AGACCGGTGCAGTGAACGCTGCAGTGCGCGCTGGCGCCGATGCCTGTGAGCGTGTGGGCGACGGCCTTGTTGCTGCTCAC
ATCATTGCTCGCCCCCACCGCGAAGTGGAGCCTGCACTGGGCAACGGCAACTTCCTTGGTCAGAAGGACTGA

Protein sequence : 
MANETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARPHREVEPALGNGNFLGQKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-11 60
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-12 54
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-11 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
csoS1/ccmK1 YP_001224400.1 carboxysome shell peptide VFG1596 Protein 7e-12 60
csoS1/ccmK1 YP_001224400.1 carboxysome shell peptide VFG1597 Protein 2e-12 54
csoS1/ccmK1 YP_001224400.1 carboxysome shell peptide VFG1598 Protein 9e-12 52