Gene Information

Name : csoS1/ccmK1 (SynRCC307_0818)
Accession : YP_001227074.1
Strain : Synechococcus sp. RCC307
Genome accession: NC_009482
Putative virulence/resistance : Virulence
Product : carboxysome shell peptide
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 743968 - 744282 bp
Length : 315 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAACTGAAACCATGGGCATTGCCCTCGGCATGATTGAAACCCGCGGCTTGGTCCCCGCGATCGAAGCAGCTGACGC
CATGACCAAGGCCGCCGAAGTGCGCCTGATCGGTCGTGAATTCGTCGGCGGCGGCTACGTCACCGTTCTGGTGCGCGGCG
AAACCGGTGCTGTGAACGCAGCTGTTCGTGCTGGTGCTGATGCTTGCGAGCGCGTCGGTGACGGCCTCGTGGCAGCCCAC
ATCATTGCCCGCCCCCACCGCGAAGTTGAGCCTGCTCTCGGCGGCAGCAGCAACTTCCTCGGCTCCAAGGACTGA

Protein sequence : 
MATETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARPHREVEPALGGSSNFLGSKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-11 60
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 5e-12 57
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-11 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
csoS1/ccmK1 YP_001227074.1 carboxysome shell peptide VFG1596 Protein 7e-12 60
csoS1/ccmK1 YP_001227074.1 carboxysome shell peptide VFG1597 Protein 2e-12 57
csoS1/ccmK1 YP_001227074.1 carboxysome shell peptide VFG1598 Protein 8e-12 52