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Name : glcD (BBta_1662) Accession : YP_001237778.1 Strain : Bradyrhizobium sp. BTAi1 Genome accession: NC_009485 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.3.15 Position : 1733510 - 1735003 bp Length : 1494 bp Strand : + Note : Evidence: Function of homologous gene experimentally demonstrated in an other organism; PUBMED: 9144771 DNA sequence : ATGGCGATCATGATGCCGGAAGCTGATCAGGCGGTGTTGGCACGGCGTGACCAGATCGTTGCTGCACTGCGTGCGATCGT ACCGGGAGAGGGCGTCATCGACAGCGCTGCCGAAATGCTCCCTTACGAGTCTGACGGGTTGATGGCCTATCGGCAGCCGC CGATGGTCGTGGTGCTGCCGGAGACCACGGCACAGGTGGCCAAGGTCCTGAAGTACTGCCACGAGCAAGGCATCAAGGTG GTTCCCCGCGGCTCGGGAACGTCACTGTCGGGCGGCGCGCTGCCGCTCGCCGACGGCGTGCTGCTCGGGCTTGGCAAGTT CAAGCGGATCCGCGAGATCGACTTCGACAACCGCGTCGTCGTGACCGAGCCCGGCGTCACCAACCTCGCCATCAGCCAGG CGGTCGCGCATGCCGGCTTCTACTACGCGCCCGATCCGTCCTCGCAGATCGCCTGCTCGATCGGTGGCAATGTCGCGGAG AATTCCGGCGGCGTGCATTGCCTCAAATACGGCATGACCACCAATAACGTGCTCGGTTGCGAGATCGTGCTGATCAATGG CGAGGTGTTGCGGATCGGAGGCAAGTGCGCCGAGAACGCCGGCTACGATCTGATGGGGCTGATCACGGGATCCGAGGGGC TGCTCGGCGTGGTCACCGAGGTGACCGTCCGGATTCTGCAGAAGCCGGAGACGGCGCGGGCGCTGATGGTCGGGTTTTCC GAGGTCGAAGCTGCCGGCGAATGCGTGGCGCGCATCATCGGAGCCGGCATCATCCCCGGCGGCATGGAGATGATGGACAA GCCTGCGATCCACGCCGCCGAGGCCTTCGTTCATGCCGGCTATCCGCTGGACGTGGAGGCGCTCTTGATCATCGAGCTCG ATGGCCCCGGCGTGGAGGTCGACGAACTGATCGGCCGCGTCGAGGCGATCGCCAATGGCTGCGGCTCGACGACATGTCGC ATCTCGACCTCCGAGGCCGAGCGCAACTTGTTCTGGGCAGGGCGCAAGGCCGCCTTTCCGGCCGTCGGCCGGATCTCGCC GGACTATCTTTGCATGGACGGCACGATCCCGCGCGGCGCATTGCCGAAGGCGCTGGCGCGGATCCGCGAGCTGTCGGAGA AGTACCAGCTCGGCTGCGCCAATGTGTTTCATGCCGGCGATGGCAATCTTCACCCGCTCATTCTTTACGACGCCAATAAG CCTGGCGAAATGGAGCGCGCCGAGGCGTTCGGCGCCGACATCCTGCGCTGTTGCGTCGAGCTCGGCGGCGTTCTGACCGG CGAGCATGGCGTCGGCATCGAGAAGCGCGACCTGATGCCGGACATGTTCACCGAGATCGACCTGAACCAGCAACAGCGCG TGAAATGCGCCTTCGACAGCCAGGGCCTGCTCAATCCCGGCAAGGTCTTCCCCACGCTGCATCGCTGCGCCGAGCTCGGG CGCATGCACGTTCATGGCGGCCGGCTCGCCTTTCCCGACCTGCCCAGGTTCTGA Protein sequence : MAIMMPEADQAVLARRDQIVAALRAIVPGEGVIDSAAEMLPYESDGLMAYRQPPMVVVLPETTAQVAKVLKYCHEQGIKV VPRGSGTSLSGGALPLADGVLLGLGKFKRIREIDFDNRVVVTEPGVTNLAISQAVAHAGFYYAPDPSSQIACSIGGNVAE NSGGVHCLKYGMTTNNVLGCEIVLINGEVLRIGGKCAENAGYDLMGLITGSEGLLGVVTEVTVRILQKPETARALMVGFS EVEAAGECVARIIGAGIIPGGMEMMDKPAIHAAEAFVHAGYPLDVEALLIIELDGPGVEVDELIGRVEAIANGCGSTTCR ISTSEAERNLFWAGRKAAFPAVGRISPDYLCMDGTIPRGALPKALARIRELSEKYQLGCANVFHAGDGNLHPLILYDANK PGEMERAEAFGADILRCCVELGGVLTGEHGVGIEKRDLMPDMFTEIDLNQQQRVKCAFDSQGLLNPGKVFPTLHRCAELG RMHVHGGRLAFPDLPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 6e-128 | 58 |
