|
Name : cycK (BBta_3073) Accession : YP_001239098.1 Strain : Bradyrhizobium sp. BTAi1 Genome accession: NC_009485 Putative virulence/resistance : Unknown Product : cytochrome C-type biogenesis protein cycK Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 3213866 - 3215845 bp Length : 1980 bp Strand : + Note : Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 5 : Inner membrane protein DNA sequence : GTGATTGCAGAGAGCGGACATTATGCCCTGGTGCTGGCGCTCGCGCTGGCGCTGATCCAGTCCACCGTGCCGATGCTTGG CGCGCATCAGCGCGACGTTGCGCTGATGAATGTCGGCCGCTCGGCGGCATTGGCGCAGCTTGTCTTCGCCGGCCTGTCCT TCATCGCGCTGATCACCCTGCACGTGACCTCGGATTTCTCCGTCGCCAACGTGTTCGAGAATTCGCACTCGATGAAGCCG CTGCTCTACAAGATCACCGGCGTGTGGGGGAACCACGAAGGCTCGATGCTGCTGTGGGTGTCGATCCTGGCGCTGTTCGG CGCCATGGTCGCACTGTTCGGCAACAATCTGCCGCTGTCGTTGCGCGCCCGCGTGCTCGCGGTGCAGGCCTGGGTCGCGG CCGCCTTCTATCTCTTCATCCTGATGACCTCCAACCCGTTCGCGCGGCTCGCCACCCCGCCGATCGAGGGGCGCGACCTC AATCCGGTGCTGCAGGACATCGGCCTCGCGGTGCATCCGCCGATGCTCTATCTCGGCTATGTCGGCTTCTCGATCTCGTT CTCCTTCGCCATCGCCGCCCTGATCGAAGGCCGCATCGATGCCGCCTGGGCGCGCTGGGTGCGTCCGTGGACCCTGATGG CCTGGATCTTCCTGACGCTCGGCATCGCCATGGGCTCGTACTGGGCCTATTACGAGCTCGGCTGGGGCGGCTGGTGGTTC TGGGACCCGGTCGAGAACGCCTCGCTGATGCCTTGGCTCGCCGGCACCGCGCTCTTGCACTCTGCGCTGGTGATGGAGAA GCGCAACGCGCTCAAGGTCTGGACCATCCTGCTGTCGATCCTGACTTTCTCGCTGTCCTTGCTGGGCACCTTCCTGGTGC GTTCCGGCGTCATCACCTCGGTGCATGCCTTCGCCAGCGATCCCACGCGCGGCGTGTTCATCCTCGGCATCCTCGTGCTG TTCATCGGCGGCAGCCTGACTTTGTTCGCCGGCCGCGCCACCGCGCTGAAGCAGGGCGGCCTGTTCGCGCCGATCTCGCG CGAGGGCGCGCTGGTGCTGAACAATCTGCTGCTCACCGTGAGCTGCGCCACCGTGCTGTTCGGCACGCTCTATCCGGTCA TCATGGAGGCGCTCGACTTCAAGCTCTCGGTCGGCGCGCCGTTCTACAACCTCACCTTCGGCCCGCTGTTTGCGCTCTTG CTGCTGATCGTGCCGTTCGGCCCGATGCTGGCCTGGAAGCGCGGCGATCTCGTCGCCGCGGCGCAGCGGCTGCTTGCGGC CGGCGTCGCGTCGCTGGTGGCGATCGCGATCGCCTGGGCCTGGGCGCGCGGCGGCAGCGCGCTGGCGCCGCTCGGCATCG GACTCGGCATCTTCGTCATCACGGGGGCCATCGTCGATCTCGTCGAGCGCAGCGGCGTCGCGCGCGTCCCCTTCAGGACC GCGCTGCACCGTACCCGCGGCCTGCCGCGCTCGGTCTGGGGTACCGCCTTCGCCCATGCCGGCCTCGGTATAGCCCTGCT CGGCATCGTCTGCGAGACCACCTGGAACAGCGAGCTGATCTCGACCTTGCGTCCGGGGGATGTCCGCAATCTCGCCGGCT ACGAGATCAAGTTCGACGGCATGACCCAGCGCCAGGGGCCGAACTTCACCGAGGTCGTCAGCACCTTCATCATCAGCGAG GACGGCAGGCAGCTCAGCGTGATGACGCCGTCCAAGCGCAGCTTCGCCACACGCGGCATGTCGACCACGGAGGCGGCGCT GATGACCCGCGGCGTCAGCCAGCTCTATGTCTCGCTCGGCGACACCACGGCCGATGGCGGCCTTGCCGTGCGCATCTATC ACAAGCCGCTGGTGCTCTTGATCTGGTTCGGCCCGGTGCTGATGGCGTTCGGCGGGCTGCTCTCGCTGTCGGATCGGCGG CTGCGCGTCGGTGCGCCGCGGCCGGCCCGTGCGGCGCGCGCGCTGCAGCCGGCGGAGTAA Protein sequence : MIAESGHYALVLALALALIQSTVPMLGAHQRDVALMNVGRSAALAQLVFAGLSFIALITLHVTSDFSVANVFENSHSMKP LLYKITGVWGNHEGSMLLWVSILALFGAMVALFGNNLPLSLRARVLAVQAWVAAAFYLFILMTSNPFARLATPPIEGRDL NPVLQDIGLAVHPPMLYLGYVGFSISFSFAIAALIEGRIDAAWARWVRPWTLMAWIFLTLGIAMGSYWAYYELGWGGWWF WDPVENASLMPWLAGTALLHSALVMEKRNALKVWTILLSILTFSLSLLGTFLVRSGVITSVHAFASDPTRGVFILGILVL FIGGSLTLFAGRATALKQGGLFAPISREGALVLNNLLLTVSCATVLFGTLYPVIMEALDFKLSVGAPFYNLTFGPLFALL LLIVPFGPMLAWKRGDLVAAAQRLLAAGVASLVAIAIAWAWARGGSALAPLGIGLGIFVITGAIVDLVERSGVARVPFRT ALHRTRGLPRSVWGTAFAHAGLGIALLGIVCETTWNSELISTLRPGDVRNLAGYEIKFDGMTQRQGPNFTEVVSTFIISE DGRQLSVMTPSKRSFATRGMSTTEAALMTRGVSQLYVSLGDTTADGGLAVRIYHKPLVLLIWFGPVLMAFGGLLSLSDRR LRVGAPRPARAARALQPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-99 | 46 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-85 | 45 |
