Gene Information

Name : glcB (BBta_6991)
Accession : YP_001242782.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : 2.3.3.9
Position : 7327036 - 7329198 bp
Length : 2163 bp
Strand : +
Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA

DNA sequence :
ATGACCCGTATCGACGCCCACGGACTGAAGATCGCCCCGGTTTTGTTCGACTTCATCGCCAAGGAGGCGGCACCCAAGAC
GGGGATCGATCCGGACGCGTTCTGGGCCGGCGTCGCCGCCATCCTGCGCGATCTCGCCCCGAAGAACCGCGCGCTACTTG
CCTACCGGGACGCCCTGCAGGACAAGATCGATGCCTGGCACCTTGCCAACAAGGGCAAGGCCTTCGACCTCGGCGCCTAT
AAGGCGTTTTTGAAGGAGATCGGGTATCTCCTGCCGGAGCCGGCGACCCACAAGGTCGAGACCGCCAATGTGGACGAGGA
GATCGGCAAGATCTGCGGCCCGCAGCTGGTGGTGCCGCTGACCAACGCGCGCTACGCGCTGAACGCCGCGAACGCACGCT
GGGGCTCGCTTTACGACGCCTTCTACGGCACCGACGCCATCCCGCATGATCCGAGCGAGGGCGGAAAGGGCTACAACAAG
GCGCGCGGCGACAAGGTGATCGCCAAGGCCAAGGCGTTTCTCGACGCGGCTGCGCCGCTCGCCACCGGCAGCCATACCGA
CGTGACCGCCTACAGCGTGATCGCGGGGCAGCTCTCGGCCAAGCTCAAGAGCGGCAACGCCACGGCGCTGAAGGATGGCG
CGCAGTTCGCGGGCTACCAGGGTTCGGCGGAAGCGCCCAGCGTGATCCTGCTCGCCAATAACGGCCTGCACATCGAGGTG
GTGATCGATCGCAGCCACGTCATCGGCAAGGACGATCCGGCCGGCGTCTCCGACATGATCCTGGAGGCCGCGGTCTCGAC
CATTCTCGACATGGAGGACTCGGTCGCCGCGGTCGATGCCGAGGACAAGGTGCTGGTCTATCGCAACACGCTCGGCCTGA
TGAACGGCACGCTCTCGGCCGATTTCGAGAAGGGCGGCAAGACGCTGACCCGCGCGCTGAACAGCGACCGCAGCTACACC
ACGCCGTCCGGCGGCACGCTGACTTTGCAAGGGCGCAGCCTGCTGCTGATCCGCAATTGCGGACATCACATGTTCACCGA
CGCCGTGCTCGACGACAAGGGCGAGGAGGTGCCGGAAGGCATTCTCGACGCTGCCGTGACCGGCCTGCTGGCGATCCACG
ACCTCAAGGGCCATTCCAAGGTCAAGAACAGCCGCACCGGCTCGATCTACATCGTCAAGCCGAAGATGCACGGCCCCGAC
GAGGTCGCGCTCACGGTCGAATTGTTCGCGCGCGTCGAGAAGCTGCTCGGCCTGCCCGAGAACAGCATGAAGGTCGGAAT
CATGGACGAGGAGCGCCGCACCACGGTGAACCTCAAGGCCTGCATCCAGCAGGCTTCCAAGCGCATCGTGTTCATCAATA
CCGGCTTCCTCGACCGCACCGGCGACGAGATCCACACCTCGATGGAAGCGGGCCCGATGATCCGCAAGAACGAGATGAAG
GCGCAGCCCTGGATCAAGTCCTATGAGGATTGGAACGTCGACATGGGCCTGACCTGCGGCCTTCCGGGCCACGCCCAGAT
CGGCAAGGGCATGTGGGCCGCGCCGGACAAGATGGCGGACATGCTGGCGCAGAAGATCGGCCATCCGCAGGCGGGCGCGA
CCACCGCCTGGGTGCCGTCACCAACCGCGGCGACGCTGCATGCCCTGCACTATCACCAGGTCAACGTGCACGCCCGTCAG
GCCGAGCTCACCAAGGGCGGCCCGCGCGCCAAGCTCGGCGACATCCTCACCATTCCGGTGTCGAACTCGAACTGGGCCCC
CGACGACGTCCGCCAGGAGATCGACAACAACTGCCAGGGCATTCTCGGCTATGTCGTGCGCTGGATCGACCAGGGCGTCG
GCTGCTCCAAGGTGCCGGACATCCACGATGTCGGCCTGATGGAGGATCGTGCGACCTTGCGCATCTCCAGCCAGCATCTT
GCCAACTGGCTGCACCATGGCGTCGTCACCAAGGACCAGGTGATGGACTCGCTGAAGCGCATGGCCGTGGTGGTCGACAA
GCAGAATGCCGGAGATCCGCTCTACAAGCCGATGGCGCCGTCATTCGATGGCGTCGCGTTCAAGGCGGCGTGCGATCTGG
TGTTCGAAGGTCGCACCCAGCCCAACGGCTACACCGAGTACATCCTGACCGCGCGGCGCCGTGAGGCAAAAGCGCAGGCC
TGA

Protein sequence :
MTRIDAHGLKIAPVLFDFIAKEAAPKTGIDPDAFWAGVAAILRDLAPKNRALLAYRDALQDKIDAWHLANKGKAFDLGAY
KAFLKEIGYLLPEPATHKVETANVDEEIGKICGPQLVVPLTNARYALNAANARWGSLYDAFYGTDAIPHDPSEGGKGYNK
ARGDKVIAKAKAFLDAAAPLATGSHTDVTAYSVIAGQLSAKLKSGNATALKDGAQFAGYQGSAEAPSVILLANNGLHIEV
VIDRSHVIGKDDPAGVSDMILEAAVSTILDMEDSVAAVDAEDKVLVYRNTLGLMNGTLSADFEKGGKTLTRALNSDRSYT
TPSGGTLTLQGRSLLLIRNCGHHMFTDAVLDDKGEEVPEGILDAAVTGLLAIHDLKGHSKVKNSRTGSIYIVKPKMHGPD
EVALTVELFARVEKLLGLPENSMKVGIMDEERRTTVNLKACIQQASKRIVFINTGFLDRTGDEIHTSMEAGPMIRKNEMK
AQPWIKSYEDWNVDMGLTCGLPGHAQIGKGMWAAPDKMADMLAQKIGHPQAGATTAWVPSPTAATLHALHYHQVNVHARQ
AELTKGGPRAKLGDILTIPVSNSNWAPDDVRQEIDNNCQGILGYVVRWIDQGVGCSKVPDIHDVGLMEDRATLRISSQHL
ANWLHHGVVTKDQVMDSLKRMAVVVDKQNAGDPLYKPMAPSFDGVAFKAACDLVFEGRTQPNGYTEYILTARRREAKAQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 60