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Name : clpB (BBta_7789) Accession : YP_001243522.1 Strain : Bradyrhizobium sp. BTAi1 Genome accession: NC_009485 Putative virulence/resistance : Virulence Product : chaperone clpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 8172922 - 8175552 bp Length : 2631 bp Strand : - Note : Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic DNA sequence : TTGTCTCTCACGAAACGTGTCGACAGGAACAAGAGTACCGCCATGCAGATCGAGAAATATACCGACCGGCTTAAAGCGCT GGTGCAATCCGCACAATCGCTCGCGCTACGAAGCGGGCACCAGCAACTCACGCCGGTTCATGTGCTGAAAGCGTTGCTGG ACGATGAAGACCGGCTAGCCCTCAATCTGATCGATGCCGCTGCGGGCGCTGGGGCGAGTGCCCAGGTTAAACAAGCGGCC GAACAGGAGCTGCAAAGGCTGCCCAAAGTCGAAGGCAGCGGCGCAGGCCAGATTTATCTCGCTCCGGAGGCGGCGCGGTT GTTCGATCAAGCCGAACAGCTATCGCAGAAAGCCGGCGATGCCTACGTCACCGTCGAATATATGTTGATGGCTCTGGCGA TGGCGAGCGGCGCCGTTGGCGACCTCCTCAAGCGCGCAGGTGTCACGCCTCAGGCGCTCAACAAGGCGATCGGTGACATC CGGAAAGGGCGAACCGCGGACACGGCATCGGCCGAACAGGGCTATGACGCGCTCAAGAAATATACGCGTGATTTCACCGA GGAGGCGCGTCAGAACAAGCTCGATCCGGTTATTGGTCGTGACGAAGAGGTCCGGCGCACCATTCAGGTGCTTTCGCGAC GGACCAAGAACAACCCTGTTCTGATCGGCGAGCCAGGAGTCGGAAAGACGGCGATCGTGGAAGGCCTGGCGCAACGCATC GTCAAGGGTGATGTGCCGGAAGCCTTGAAAAGCCGTCGGCTGCTGGCGCTCGATCTTGGAGCGCTGCTGGCTGGGGCCAA ATATCGAGGCGAATTTGAAGAGCGCCTCAAGGCCGTGCTGCAGGAGCTTAGCAGCGCGGGCGACGTCATTCTGTTCATTG ACGAACTCCACACCCTGGTTGGCGCCGGCAAGGCGGAAGGGGCGATGGATGCTTCCAATATGCTCAAGCCTGCGCTTGCG CGTGGCGAACTGCACTGCATCGGCGCAACGACGCTGGACGAGTACCGAAAGCATATCGAGAAGGACGCGGCGCTCGCTCG ACGCTTCCAGCCGGTGTTTGTTGGCGAGCCGTCGGTCGAGGAGACGATTTCGATCTTGCGCGGTCTCAAAGAAAAATACG AGGTCCATCACGGCGTTCGCATTACCGATGGTGCGATTGTCGCCGCCGCGACCCTGTCCAATCGCTACATCACCGATAGA TTTTTGCCGGACAAAGCCATTGACCTTGTGGACGAGGCGGCTAGCCGCGTCCGCATGGAAGCCGATTCCAAGCCGGAGGA GGTCGACGAAATCGACCGCCGCATCATTCAGCTTAAGATCGAGCGTGAGGCCCTGAAGAAAGAGACAGATGAAGCGTCGA AGGAGCGCCTCAAGAAAGTCGACCAAGAAATCGCCGAGTTGGAAAAGAAATCGGCCGATCTCACCTCGATTTGGAAGGCG GAGAAGGAAAAGCTCGCCTCCGTGCAGAAAATCAAAGAGCAACTCGATCAGGCACGCAGCGAACTGGAGAGCGTGCAGCG GCGCGGCGATCTCACGCGTGCTGGCGAGCTTATGTATTCCATTATCCCGCAACTGGAGAAGAAGCTCGCCGAGACCCCCG CGCAAGGACGGATGTTCAAGCAGGAGGTAACCGCCGAGGAGATCGCAGAAGTCGTGTCGCGGTGGACTGGAATTCCGGTT GACAAGATGATGGAGGGCGAGCGCGAAAAACTGCTTCACATGGAAGATAAGCTGCGTGAACGCGTGGTGGGGCAGGACCA GGCCATTGTCGTCGTCGCGGATGCCGTGCGGCGAGCACGGGCCGGTCTTCAGGATCCCCATCGGCCGATCGGCTCATTCC TGTTCTTGGGCCCCACCGGCGTCGGCAAGACGGAGCTTTGCAAGGCGCTTGCGGAATTCCTGTTCGATGACGAACAGGCA ATGGTTCGCATCGACATGTCCGAATACATGGAAAAGCATTCGGTTGCCCGACTTATCGGCGCGCCTCCCGGCTATGTCGG CTATGAGGAAGGAGGTTCCCTGACGGAAGCCGTCCGCAGGCGCCCGTATCAGGTGATTTTGTTCGATGAGGTCGAGAAGG CACACAGCGATGTTTTCAACATCTTGCTGCAGGTGCTCGACGACGGGCGGCTTACCGACGGACAAGGCCGCACCGTCGAT TTCCGCAACACGATCATCGTGCTCACCTCAAACCTGGGGGCCGAATATCTGGCCGCGCTTCCCGAAGGAAAACCGGCCGA GGAGGCGCGCGAACAGGTGATGGAGGTGGTGCGGCGCTCCTTCCGACCGGAATTTCTCAACCGTCTCGATGAGATCATCT TGTTCAACCGGCTCGGTCGCAGCGAAATGAAGCGGATTGTCGACATTCAGCTTCGGCATCTGCAGTCGCTGCTGGCGGAT CGCAAGATCACGCTCGAAGTCGACGACAAGGCGAAGACGTGGCTCGGCAACACCGGTTACGATCCGGTCTACGGCGCGCG ACCGCTCAAACGCGTCATTCAGCGACAACTCCAGAATCCGCTCGCCAGCATGCTTCTGTCAGGAAAAATCAAAGATGGCG ATACGGTCAAGGTAACCGTGCTTGATGGCCAGATTGCAGTGAACGGCTCCAAATTGGCGCAGGCAGCATAG Protein sequence : MSLTKRVDRNKSTAMQIEKYTDRLKALVQSAQSLALRSGHQQLTPVHVLKALLDDEDRLALNLIDAAAGAGASAQVKQAA EQELQRLPKVEGSGAGQIYLAPEAARLFDQAEQLSQKAGDAYVTVEYMLMALAMASGAVGDLLKRAGVTPQALNKAIGDI RKGRTADTASAEQGYDALKKYTRDFTEEARQNKLDPVIGRDEEVRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRI VKGDVPEALKSRRLLALDLGALLAGAKYRGEFEERLKAVLQELSSAGDVILFIDELHTLVGAGKAEGAMDASNMLKPALA RGELHCIGATTLDEYRKHIEKDAALARRFQPVFVGEPSVEETISILRGLKEKYEVHHGVRITDGAIVAAATLSNRYITDR FLPDKAIDLVDEAASRVRMEADSKPEEVDEIDRRIIQLKIEREALKKETDEASKERLKKVDQEIAELEKKSADLTSIWKA EKEKLASVQKIKEQLDQARSELESVQRRGDLTRAGELMYSIIPQLEKKLAETPAQGRMFKQEVTAEEIAEVVSRWTGIPV DKMMEGEREKLLHMEDKLRERVVGQDQAIVVVADAVRRARAGLQDPHRPIGSFLFLGPTGVGKTELCKALAEFLFDDEQA MVRIDMSEYMEKHSVARLIGAPPGYVGYEEGGSLTEAVRRRPYQVILFDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVD FRNTIIVLTSNLGAEYLAALPEGKPAEEAREQVMEVVRRSFRPEFLNRLDEIILFNRLGRSEMKRIVDIQLRHLQSLLAD RKITLEVDDKAKTWLGNTGYDPVYGARPLKRVIQRQLQNPLASMLLSGKIKDGDTVKVTVLDGQIAVNGSKLAQAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-155 | 44 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-93 | 43 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-96 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-96 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001243522.1 | chaperone clpB | VFG2076 | Protein | 2e-107 | 45 |
| clpB | YP_001243522.1 | chaperone clpB | VFG2084 | Protein | 3e-99 | 41 |
