Gene Information

Name : 16S_rRNA (OTBS_r01)
Accession : -
Strain : Orientia tsutsugamushi Boryong
Genome accession: NC_009488
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1322598 - 1324120 bp
Length : 1523 bp
Strand : +
Note : -

DNA sequence : 
TTAAGTATCAAACTTAAGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGCATGCCTAACACATGCAAGTCGAACGAAT
TAATGCTGAGCTTGCTTAGCATTAATTAGTGGCAAACGGGTGAGTAACACGTGGGAATCTGCCCATCAGTACGGAATAAC
ATTTAGAAATAAGTGCTAATACCGTATGCCCTCTATAAGGAGGAAAGATTTATCGCTGATGGATGAGCCCGCGGCAGATT
AGGTAGTTGGTAAGGTAATGGCTTACCAAGCCTGTGATCTGTAGCTGGTCTGAGAGGACGAACAGCCACACTGGGACTGA
GACACGGCCCAGACTCCTACGGGGGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGT
GAGTGATGAAGGCCTTAGGGTTGTAAAGCTCTTTTAGTAGGGATGATAATGACAGTACCTACAGAAAAAGCCCCGGCTAA
CTCCGTGCCAGCAGCCGCGGTAAGACGGAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGGGCGCGTAGGCGGTT
TAATAAGTTAGGAGTGAAATCCCGGGGCTTAACCCTGGAACTGCTTCTAAAACTGTTAGGCTAGAGTATGGTAGAGGATG
ATGGAATTTCTAGTGTAGAGGTAAAATTCTTAGATATTAGAAGGAACACCAGTGGCGAAAGCTGTCATCTGGGCCATTAC
TGACGCTGAGGCGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGAGTGCTAGA
TATTGGGGGATTTTTCTTTCAGTTTCGTAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGGTCGCAAGATTAAAACT
CAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGCGGTTTAATTCGATGATCCGCGAAAAACCTTACCAACTCT
TGACATGGTAGTCGCGAAAAATGGAGACATTTTTCTTCAGTTTGGCTGGACTACACACAGGTGTTGCATGGCTGTCGTCA
GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATTCTTATTTGCCAGCGGGTAATGCCGGGAA
CTATAGGAAAACTGCCGGTGCTAAGCCGGAGGAAGGTGGGGATGAGGTCAAGTCATCATGGCCCTTATGAGTTGGGCTAC
ACGCGTGCTACAATGGTACCTACAGAGTGATGCGATACGGTGACGTGGAGCTAATCATTAAAAGGTATCTCAGTTCGGAT
TGCACTCTGCAACTCGAGTGCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATACGTTCTCGGG
CCTTGTACACACTGCCCGTCGCACCATGGGAGTCAGTGGTACCTGAAGTTGGTGAGCTAACGTAAGAGGCAGCTAACCAC
GGTAGAACTGGTGACTGGGGTAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATTACCTCCTTTAAAGACA
ATT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-128 87.7
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-128 87.7
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-128 86.9
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-128 86.9
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-128 86.9
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-128 86.9