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Name : rnhA (OTBS_1582) Accession : YP_001248945.1 Strain : Orientia tsutsugamushi Boryong Genome accession: NC_009488 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 1544127 - 1544633 bp Length : 507 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : GTGACTAACTATGCTTGCTCTATCACTAACAACATTCCAGTTAAGATATATACAGATGGCGCATGTAGCCATAATCCAGG GCCAGGAGGTTGGGGAGTATATTTAAGTTATAAGAATCATGAAAAAAAAGTTTATGGATCTAACATAAATACTACAAATA ACCGAATGGAGTTAACAGCAACAATAGAGGCGTTGCGGCTTCTTAAGCATAGTTATAAAGTAGAATTATATACTGACAGT CAGTATGTTCAAATGGGTATTACTAAGTGGATAAAAAAGTGGATAAAAAATAATTGGGAAACAAGCAACAAGCAATTGGT TTGTAATGTTGATTTATGGCAGTTATTATATACTTTGATTCAAAAACATCAAGTTAGTTGGCATTGGGTGAGAGGACACT CTGGTAATATAGGTAATGAAATTGCTGATAAATTAGCAACTAATGGAAAAATTGAAGCAATGAAAATAGCAAAAAATAAT GAAAATACTAAGAAATTTCTTGATTAG Protein sequence : MTNYACSITNNIPVKIYTDGACSHNPGPGGWGVYLSYKNHEKKVYGSNINTTNNRMELTATIEALRLLKHSYKVELYTDS QYVQMGITKWIKKWIKNNWETSNKQLVCNVDLWQLLYTLIQKHQVSWHWVRGHSGNIGNEIADKLATNGKIEAMKIAKNN ENTKKFLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 3e-22 | 52 |
