Gene Information

Name : cchA (CBO2106)
Accession : YP_001254602.1
Strain : Clostridium botulinum ATCC 3502
Genome accession: NC_009495
Putative virulence/resistance : Virulence
Product : microcompartments family protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2246993 - 2247283 bp
Length : 291 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATATGATGCATTAGGAATGATAGAAACAAAAGGATTAGTAGGATCAATAGAAGCAGCAGATGCTATGGTTAAAGC
AGCAAACGTATATTTAATAGGTAAAGAATATGTTGGAGGCGGACTTGTAACTGTTATGGTTAGAGGTGATGTTGGAGCTG
TTAAAGCTGCTACAGACGCTGGTGCTGCAGCTGCACAACGTGTTGGAGAATTAGTATCAGTTCACGTTATACCACGTCCA
CACTCTGAAGTTGAAGTAATTCTTCCATCATCTAAAGAAGTTGCAAAATAA

Protein sequence : 
MKYDALGMIETKGLVGSIEAADAMVKAANVYLIGKEYVGGGLVTVMVRGDVGAVKAATDAGAAAAQRVGELVSVHVIPRP
HSEVEVILPSSKEVAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-14 68
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 5e-15 66
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-13 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cchA YP_001254602.1 microcompartments family protein VFG1597 Protein 1e-14 68
cchA YP_001254602.1 microcompartments family protein VFG1596 Protein 2e-15 66
cchA YP_001254602.1 microcompartments family protein VFG1598 Protein 9e-14 62