Gene Information

Name : Pput_1542 (Pput_1542)
Accession : YP_001266883.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 1728124 - 1728891 bp
Length : 768 bp
Strand : +
Note : TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein

DNA sequence : 
ATGAAAATAAGCTGGACGTGGTTCCACAAGCTGGGCTCCCCGAAATGGTTCTATGCCATCAGCGGCCGCATGCTGCCGTG
GCTGGCCGGTGCTGCCGTGCTCCTGCTGCTGGTCGGCATCACCTGGGGCCTGGCCTTCGCCCCCCAGGACTACCAGCAAG
GCAACAGCTTCCGCATCATCTATATCCACGTGCCGGCGGCGATGCTGGCGCAGTCCTGCTATGTGCTACTGGCGGTGGCC
GGGGTGGTGGGGCTGGTGTGGAAGATGAAACTGGCCGACGTTGCCCTGCAATGTGCCGCGCCCATTGGCGCCTGGATGAC
CGCCGTGGCGCTGGTTACCGGCGCCATCTGGGGCAAACCGACCTGGGGCAGCTGGTGGGTGTGGGATGCCCGCCTTACGT
CCATGCTCATCCTGCTGTTCCTGTACTTCGGCATTATTGCGCTGGGCCAGGCGATCAGTAATCGTGACAGTGCAGCCAAG
GCCTGTGCGGTGCTTGCGATTGTCGGTGTGGTGAATATCCCGATCATCAAGTATTCAGTGGAGTGGTGGAACACCCTGCA
CCAGGGCGCCACCTTCACCCTTACCGAAAAGCCGGCGATGCCGGCCGAAATGTGGCTGCCGCTGTTGTGCACGGCGCTGG
GTTTCTACTGTTTCTTCGGCGCCGTACTGCTGCTGCGCATGCGCCTTGAAGTGCTCAAGCGCGAAGCACGCGCCAGTTGG
GTCAGGGACGAAGTATTGAACAGCCTGGGGCGGAGGGCCACACAATGA

Protein sequence : 
MKISWTWFHKLGSPKWFYAISGRMLPWLAGAAVLLLLVGITWGLAFAPQDYQQGNSFRIIYIHVPAAMLAQSCYVLLAVA
GVVGLVWKMKLADVALQCAAPIGAWMTAVALVTGAIWGKPTWGSWWVWDARLTSMLILLFLYFGIIALGQAISNRDSAAK
ACAVLAIVGVVNIPIIKYSVEWWNTLHQGATFTLTEKPAMPAEMWLPLLCTALGFYCFFGAVLLLRMRLEVLKREARASW
VRDEVLNSLGRRATQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 1e-38 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_1542 YP_001266883.1 heme exporter protein CcmC VFG1856 Protein 3e-43 50