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Name : Pput_1545 (Pput_1545) Accession : YP_001266886.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1729513 - 1731501 bp Length : 1989 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein DNA sequence : ATGAACGCAGCACTGGTAGTCCCCGAACTGGGCCAGTTGGCGATGATTCTGGCCATCTGCTTTGCCGTCGTACAGGCCAG TGTGCCGTTGCTTGGCGCGTGGCGTGGCGACAGCCTGTGGATGAGCCTGGCGCGGCCGGCAGCGTGGGGGCAGTTCGCCT TCCTGGCGTTTGCCTTTGCCTGCCTGACCCATGCCTTCATGACAGACAATTTCTCGGTCGCCTATGTGGCCAGCAACTCC AACAGCGCCTTGCCCTGGTACTACAAGTTCAGTGCGGTGTGGGGCGCCCATGAGGGTTCGTTGCTGCTTTGGGCGCTGAT CCTCGGCGGCTGGACCTTTGCCGTGTCGGTGTTCTCCCGGCAGTTGCCGCAGGTGATGCTGGCCCGCGTGCTGGCGGTAA TGGGCATGATCAGCGTGGGCTTCCTGAGCTTCCTGATCATTACTTCCAACCCGTTCCAGCGCCTGCTGCCGCAGGTGCCG ACCGATGGCCGTGACCTTAACCCGCTGCTGCAGGACTTTGGCCTGATCGTTCACCCACCCATGCTCTACATGGGCTATGT GGGCTTCTCGGTGGCCTTCGCGTTCGCCATTGCCGCCTTGCTCGGCGGCCGGCTGGACGCTGCCTGGGCGCGCTGGTCGC GGCCGTGGACCATCGTCGCCTGGGCTTTCCTGGGTGTTGGCATCACCTTGGGGTCGTGGTGGGCCTACTACGAACTGGGC TGGGGTGGCTGGTGGTTCTGGGACCCGGTGGAAAACGCCTCGTTCATGCCTTGGCTGGTGGGCACCGCACTGATCCACTC GCTGGCGGTGACCGAGAAACGCGGGGTGTTCAAGAGCTGGACGGTGCTGCTGGCAATTGCCGCATTCTCCCTGAGCCTGC TGGGTACCTTCCTGGTGCGTTCCGGGGTGCTGACCTCGGTGCACGCGTTTGCCGCCGACCCGTCGCGGGGTATTTTCATC CTGTTTTTCCTGCTGTTCGTGGTCGGCGGGTCGCTCACCCTGTTCGCCCTGCGCGCACCGGTGGTCAAGAGCCAGGTCGG TTTCGCCCTGTGGTCGCGTGAAACGCTGCTGCTGGCCAACAACCTGGTGCTGGTGGTCGCGGCTTCGATGATTCTGCTTG GTACCCTGTACCCATTGGTGCTCGATGCCCTGACCGGGGCCAAGCTGTCGGTCGGCCCGCCCTATTTCGACGCCTTGTTC CTGCCACTGATGGCGCTGCTGATGGTGGTGCTGAGCGTGGGCGTGGTGGTGCGCTGGAAGGACACCCCGGGCAAATGGCT GGTCAGCATGATGACCCCGGTATTGATCGGCAGTGCCATCCTTGCCCCGGTTGCCGGCTTTATCGTCGACGACTTCGACT GGCCGACGCTGACGGCCTTCGCCCTGGCCGCCTGGGTAGTGCTTGGCGGGCTGCGTGACATTTTCGACAAGACCCGCCAC AAGGGCCTGGTCAAAGGCCTGCCGGGCCTGGGCCGCAGCTACTGGGGCATGCAACTGGCGCACCTGGGCCTGGCGGTGTG CGCGCTGGGCGTGGTGCTGTCCAGCAACAACAGCGCCGAGCGCGACCTGCGCATGGCGCCGGGCGAAAGCGTGGAGCTGG GTGGCTATCACTTCCTGTTCCAGGGCGCCAAGCACTTCGAGGGGCCGAACTTCATCTCTGACAAGGGCACCATCGTGATC AGCCGCGATGGCCGTGAAGTGACCACACTGTACCCGGAGAAGCGCCTGTACACCGTGCAACAGTCGATGATGACCGAAGC GGGCATCGACGCCGGCTTTACCCGCGACCTGTACGTCGCGCTTGGCGAGCCACTGGAGAATGGCGCCTGGGCTGTGCGCA TACATATTAAGCCTTACGTCCGCTGGATCTGGCTGGGCGGTCTGCTGACCGGCCTGGGCGGGTTGCTGGCGGCCCTCGAC CGGCGCTACCGCGTCAAGGTCAAGACCCGGGTGCGTGATGTCCTGGGCGTGTCTGGAGCAGCTGCATGA Protein sequence : MNAALVVPELGQLAMILAICFAVVQASVPLLGAWRGDSLWMSLARPAAWGQFAFLAFAFACLTHAFMTDNFSVAYVASNS NSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISVGFLSFLIITSNPFQRLLPQVP TDGRDLNPLLQDFGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGVGITLGSWWAYYELG WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFAADPSRGIFI LFFLLFVVGGSLTLFALRAPVVKSQVGFALWSRETLLLANNLVLVVAASMILLGTLYPLVLDALTGAKLSVGPPYFDALF LPLMALLMVVLSVGVVVRWKDTPGKWLVSMMTPVLIGSAILAPVAGFIVDDFDWPTLTAFALAAWVVLGGLRDIFDKTRH KGLVKGLPGLGRSYWGMQLAHLGLAVCALGVVLSSNNSAERDLRMAPGESVELGGYHFLFQGAKHFEGPNFISDKGTIVI SRDGREVTTLYPEKRLYTVQQSMMTEAGIDAGFTRDLYVALGEPLENGAWAVRIHIKPYVRWIWLGGLLTGLGGLLAALD RRYRVKVKTRVRDVLGVSGAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-110 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 7e-103 | 56 |
