|
Name : rnhA (Pput_1723) Accession : YP_001267063.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 1974670 - 1975116 bp Length : 447 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGAGCGATAGCGTCGAGATGTTTACGGATGGTGCCTGCAAGGGCAACCCTGGCCCGGGTGGCTGGGGCGTGCTGATGAT CTACAAGGGCGTCGAGAAGGAACTGTGGGGCGGCGAACGTGAGACCACCAACAACCGCATGGAGCTGATGGCCGCGATCC AGGGCCTGATGTCGCTCAAGCGTGAATGCGAGGTGGTACTGACCACCGACTCGCAGTACGTGATGAAGGGCATCAACGAA TGGATGGTCAACTGGAAGAAGCGCGGCTGGAAGACCGCCGCCAAGGAGCCGGTGAAGAACGCTGACTTGTGGCAGCAGCT CGATGAGCAGGTCAACCGCCACAAGGTGACCTGGAAGTGGGTACGCGGCCATATCGGCCACCCCGGCAACGAACGCGCCG ACCAGCTGGCCAACCGTGGGGTCGATGAGGTGCGCGCCCAGCGTTGA Protein sequence : MSDSVEMFTDGACKGNPGPGGWGVLMIYKGVEKELWGGERETTNNRMELMAAIQGLMSLKRECEVVLTTDSQYVMKGINE WMVNWKKRGWKTAAKEPVKNADLWQQLDEQVNRHKVTWKWVRGHIGHPGNERADQLANRGVDEVRAQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 6e-39 | 60 |
