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Name : glcF (Pput_2016) Accession : YP_001267340.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Unknown Product : glycolate oxidase iron-sulfur subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : - Position : 2277711 - 2278946 bp Length : 1236 bp Strand : - Note : PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein DNA sequence : ATGCAAACCAACCTTAGCGAAACCTCGCGCCGCCTGGCCCGCGCCGACGAAGCCGAGCGCATCCTGCGCACCTGCGTACA TTGCGGTTTCTGCACCGCCACCTGCCCCACTTACCAGTTGCTGGGCGACGAACTGGACGGCCCGCGCGGGCGCATCTACC TGATCAAGCAGATGCTCGAAGGCGAGCCGGTCACCGCCAGCACCCAATTGCACCTGGACCGCTGCCTGACCTGCCGCAAC TGCGAAACCACCTGCCCATCGGGGGTGAAGTACCACGACCTGCTGGACATCGGCCGCGCAGTGGTCGAGCAGCAGGTGCC ACGCCCACTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCC GCAGCGGCCAGGCGTTGCGCCCGCTGCTACCGGCCTCACTCAAACGCAAGTTGCCGGCGCAGGTCACCACACCCGGCCAG CGTCCGGCAGTGCGCCATGCGCGCCGGGTACTGATGCTGGAAGGTTGCGTGCAGCCAGCCCTGTCACCCAATACCAATGC CGCGGCTGCGCGGCTGCTCGACCGCCTGGGCATCAGTGTGCAACCCATCCTGCAGGCCGGATGCTGTGGCGCGGTGGACT ATCACCTGAATGCTCAGGCGCAAGGCCTGCAGCGGGCACGGCGCAATATCGACGCCTGGTGGCCCGCCATCGAAGCGGGT GCCGAGGCGATCGTGCAGACCGCCAGCGGCTGCGGCGCGTTTGTCCGCGACTATGGCCATCTGCTGGAGAAAGACCCCCA TTACGCTGCCAAGGCGGCACGGGTCAGTGCACTTTCCCGCGATCTGGTGGAAATCCTGCGCGATGAGCCAATCGAACAAT TGGCCCTGTGCGCCGAACAGCGCCTGGCCTTCCACTGCCCATGCACCCTGCAGCACGCACTGAAGCTGGGCGGCGCGGTA GAGGCGCTGCTGACACGGCTTGGCTTTACCCTGACCTCGGTGCCCGATGGCCACCTGTGCTGCGGCTCGGCAGGGACCTA TTCGCTGACCCAACCTGAACTGTCACTGCAACTTCGCGACAATCGTCTGAATGCGCTGGAAAGCGGTAAACCGCACATCA TTGCCACGGCCAACATAGGCTGCCAGGCCCACCTCGATGGGGCTGGACGCACACCCGTGCGCCACTGGATCGAAATCGTC GAAGCCGCCTTGAACCCGGAGCCCGCCCATGCTTAG Protein sequence : MQTNLSETSRRLARADEAERILRTCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEGEPVTASTQLHLDRCLTCRN CETTCPSGVKYHDLLDIGRAVVEQQVPRPLGQRLLRLGLRAVVPRPALFKALTRSGQALRPLLPASLKRKLPAQVTTPGQ RPAVRHARRVLMLEGCVQPALSPNTNAAAARLLDRLGISVQPILQAGCCGAVDYHLNAQAQGLQRARRNIDAWWPAIEAG AEAIVQTASGCGAFVRDYGHLLEKDPHYAAKAARVSALSRDLVEILRDEPIEQLALCAEQRLAFHCPCTLQHALKLGGAV EALLTRLGFTLTSVPDGHLCCGSAGTYSLTQPELSLQLRDNRLNALESGKPHIIATANIGCQAHLDGAGRTPVRHWIEIV EAALNPEPAHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 3e-138 | 73 |
