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Name : Pput_2018 (Pput_2018) Accession : YP_001267342.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 2280008 - 2281507 bp Length : 1500 bp Strand : - Note : TIGRFAM: glycolate oxidase, subunit GlcD; PFAM: FAD linked oxidase domain protein DNA sequence : ATGAATATCCTGTATGACGAACGCGTCGATGGCGCGCTGCCCAACGTGGACCTGGCCGCCCTGTTGCAGGCGCTGCGCGA TGCACTGCCGGACCTTGAAATCCTGCACCGCGATGAAGACCTCAAACCGTACGAATGCGACGGCCTGTCGGCCTACCGCA CCGTGCCACTGCTGGTGGCGCTGCCCGAGCGCCTGGAGCAGGTGCAGACGCTGTTGAAGCTTTGCCACCAGCGCGGCGTA CCGGTGGTTGCGCGTGGCGCCGGTACCGGCCTGTCTGGTGGTGCCCTGCCGCTGGCCAAGGGCATCCTGCTGGTGATGGC GCGCTTCAACCGTATCCTCGAGGTCAACCCGCAGGGGCGTTACGCCCGCGTGCAACCGGGCGTACGCAACCTGGCCATCT CCCAGGCCGCCGCACCCCATGGCATGTATTACGCACCCGACCCTTCCTCGCAAATTGCCTGCTCGATCGGCGGCAACGTC GCCGAAAACGCCGGTGGCGTGCACTGCCTCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGAAATCCTTACGGT CGAGGGCGAACGCCTGAGCCTCGGCAGCGATGCCTTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCACCGGCTCCG AAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGCCCCAGGTGGCGCGGGTGATACTGGCCAGT TTCGACAGCGTCGAGGACGCTGGCCGGGCAGTTGCCGACATCATCGCTGCCGGCATCATTCCCGGCGGCCTGGAGATGAT GGACAACCTGGCGATCCGCGCCGCTGAAGACTTCATCCATGCCGGCTACCCGGTGGACGCGGCGGCGATCCTGCTGTGCG AACTGGATGGCGTGGAAGCCGATGTTCACGACGACTGCGCGCGCGTCGCCGCCGTGCTGACCCAAGCCGGGGCCCGCGAG GTACGCCTGGCCTGCGACGAAGCCGAGCGTGTTCGCTTCTGGGCCGGGCGCAAGAACGCCTTCCCGGCCGTGGGGCGCCT CTCCCCGGACTACTACTGCATGGACGGCACCATCCCGCGCCGCGAGTTACCACGGGTGCTCAAGGGCATCAGCGACCTGT CCGCGGAGTACGGCCTGCGGGTCGCCAATGTGTTCCATGCCGGCGACGGCAACATGCACCCTTTGATCCTGTTCGATGCC AACCTGCCCGGCGAGCTGGCGCGTGCCGAAGCGATCGGCGGCAAGATTCTGGAACTGTGTGTGAAGGTGGGCGGCAGCAT CACCGGTGAACACGGCGTGGGGCGCGAGAAGATCAACCAGATGTGCGCGCAGTTCAACAGCGACGAAATTACCCTGTTCC ACGCGGTGAAGGCCGCCTTCGACCCCCAGGGCCTGCTCAACCCCGGCAAGAACATTCCCACCCTGCACCGCTGCGCCGAA TTCGGCGCCCTGCACGTGCACCAGGGGCAACTGCCCTTCCCCGAGCTGGAGCGCTTCTGA Protein sequence : MNILYDERVDGALPNVDLAALLQALRDALPDLEILHRDEDLKPYECDGLSAYRTVPLLVALPERLEQVQTLLKLCHQRGV PVVARGAGTGLSGGALPLAKGILLVMARFNRILEVNPQGRYARVQPGVRNLAISQAAAPHGMYYAPDPSSQIACSIGGNV AENAGGVHCLKYGLTVHNVLKVEILTVEGERLSLGSDALDSPGFDLLALFTGSEGMLGIVTEVTVKLLPKPQVARVILAS FDSVEDAGRAVADIIAAGIIPGGLEMMDNLAIRAAEDFIHAGYPVDAAAILLCELDGVEADVHDDCARVAAVLTQAGARE VRLACDEAERVRFWAGRKNAFPAVGRLSPDYYCMDGTIPRRELPRVLKGISDLSAEYGLRVANVFHAGDGNMHPLILFDA NLPGELARAEAIGGKILELCVKVGGSITGEHGVGREKINQMCAQFNSDEITLFHAVKAAFDPQGLLNPGKNIPTLHRCAE FGALHVHQGQLPFPELERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 0.0 | 82 |
