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Name : Pput_2962 (Pput_2962) Accession : YP_001268274.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Unknown Product : relaxase Function : - COG functional category : - COG ID : - EC number : - Position : 3342578 - 3344365 bp Length : 1788 bp Strand : + Note : PFAM: protein of unknown function DUF1528; Relaxase DNA sequence : ATGGAAGGGGGCGCAAGGGTAAGAGGCTTATCCGAAAAGGCAAAAGGACCTTTTGAACGCAAGACAGGTACTGCGATGAA ACGCTGGTGGTTCAAACCGCAAAAAGGCCTTCCCGAAGAGTCCACCCCCGCCGCCGTGGGCTTTCATCAACCACTGTCGG CGGAATCACTGCTCGCTGCCAGCCATCGAAAAAAGCTGCTTGCTCGCATCTGGCAGTACACGGCCCTCTCCCCGCCACAG TTCGAACAACTCTACCTCGAACCGATTCGTCGCTACGCCACCTATGTACAGCAACTACCGGCCAGTGAGAGCCATCACCA TGCCTACCCAGGTGGCATGCTCGACCACGGCTTGGAGCTGGTGGCATGCAGCCTGAAGTTGCGCCAGTCCTACCTGCTCC CCGGTGGTGCCGCTCCGGAAGACCAGGCTGCGCAGGCTGATGCCTGGAGCGCCGCCATTGCCTATGGCGCCCTGCTCCAT GACGTGGGTAAAATCGCCGTCGATCTCCAGGTGGAGTACCAGAATGGTGACCGCTGGCACCCCTGGCACGGCCCTTTGAA TCAGCCCTACCGCTTCCGCTACGTCCCCGACCGGGATTACCAACTGCACGGTGCCGCCGCTGGGCTGCTGTATACGCAGA TCTTGACGCCCACGCTGCTTGACTGGCTCAGCAGCTACCCAGAATTGTGGAGACAATTGCTGTCCTTGCTGGCCGACCAC TACGAGCAGGCCGGCACACTCGGGGAGTTGGTGCTGCAAGCAGACCGGGTATCCACGGCACAGAACATTGGGGCCAACCC CACCAAAGCACTGCAGGCACCTAAACATTCGCTGCAGCATCACCTGCTCATGGGGCTACGCCACCTGGTCAAAAACGAGT TCAAGCTCAACCAGCCCGGTGCTGCCGGCTGGCTCACTGTTGACCACCTGTGGTTGGTCAGCAAAACCGCGACCGACAGG CTGCGTGCCTACCTGTTGGCCCAATCGGTGGACGGTATTCCCTCCTCCAACATCGCCATGTTCGATGAACTGCAATCACA TGGATTGGTGGATGAGACAGATAAAGGGAAAGCGGTGTGGAGCGCCGCCGTCACAGACGGGGACTGGCAGCATCGCTTTA CCTTTCTCCGCCTGAAACCGAGCCTGATTTGGGCCGATGAACCTCGGCCAGACTGCTTCAACGGAACGATTGAGTCGATG ATGGGCGATTCCCTGCCACCTCATGAAGCCCGCGAGTCAGCCCCAGATCGGCCGCACGTAGCCCCGAAACCAAAACAGCA CGACCCCGAGCTTTTGAATCAGGATTTCGACTACCTCGACGATTTGATGGAAATGTTGCAAGTGCCAGGCGAGCTCGAAA CTGGATCAAGCACGGGAAGCCTGCAATCAACCGCTGCGCCACCTCAGAATTCCGTGGGCCTTGCCTTTCTCGAGTGGCTG CGCGACGGAATCCACACACATCGCTTACTGGTCAACGACAGCAAAGCAAAGGTCCACACCGTGGATGGCACTTTTTTCCT GGTCACTCCGGGCATTTTCCAGCGTTACGCAGCCGAGCATCTAGAGCAGCCTGACGGCGCGGCTCAGAAAGAACCTTGGC GACGTATTCAACGCGAATTTGAAAAGCTGGATGCTCATCTGAGAAAGCCCAATAGCCAGAACATTTGGACTTGCACTGTA CGAGGCCCGCGGAAAACCACATCCCTTAATGGCTACATCCTGCAAAATGTCAATCTCGTTGGTCTGACGCCACCTCCAGA CAACCCCTTCCTAAAGTTACAGTTTTGA Protein sequence : MEGGARVRGLSEKAKGPFERKTGTAMKRWWFKPQKGLPEESTPAAVGFHQPLSAESLLAASHRKKLLARIWQYTALSPPQ FEQLYLEPIRRYATYVQQLPASESHHHAYPGGMLDHGLELVACSLKLRQSYLLPGGAAPEDQAAQADAWSAAIAYGALLH DVGKIAVDLQVEYQNGDRWHPWHGPLNQPYRFRYVPDRDYQLHGAAAGLLYTQILTPTLLDWLSSYPELWRQLLSLLADH YEQAGTLGELVLQADRVSTAQNIGANPTKALQAPKHSLQHHLLMGLRHLVKNEFKLNQPGAAGWLTVDHLWLVSKTATDR LRAYLLAQSVDGIPSSNIAMFDELQSHGLVDETDKGKAVWSAAVTDGDWQHRFTFLRLKPSLIWADEPRPDCFNGTIESM MGDSLPPHEARESAPDRPHVAPKPKQHDPELLNQDFDYLDDLMEMLQVPGELETGSSTGSLQSTAAPPQNSVGLAFLEWL RDGIHTHRLLVNDSKAKVHTVDGTFFLVTPGIFQRYAAEHLEQPDGAAQKEPWRRIQREFEKLDAHLRKPNSQNIWTCTV RGPRKTTSLNGYILQNVNLVGLTPPPDNPFLKLQF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C36 | AAN62129.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 6e-126 | 52 |
| ORF SG44 | AAN62266.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 2e-131 | 51 |
| unnamed | ABR13343.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 4e-121 | 47 |
| RL003 | AAP84130.1 | pathogenesis-related protein | Not tested | PAPI-1 | Protein | 1e-119 | 46 |
| pph99 | CAI36140.1 | predicted HD-superfamily hydrolase | Not tested | PPHGI-1 | Protein | 5e-110 | 45 |
