Gene Information

Name : Pput_3496 (Pput_3496)
Accession : YP_001268806.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Virulence
Product : outer membrane receptor FepA
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4771
EC number : -
Position : 3903461 - 3905695 bp
Length : 2235 bp
Strand : -
Note : Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space

DNA sequence :
ATGCAGTGCAGAACTTCATCCAACAGCCTGGCCCTGGCGTTCGTCGCGCTGGCGTCGCCGTCCATGCTGGCGACTGCGGC
AGAGTCTGAGGAGCTGCGTGCGGGTGAGGTAGTGGAAGCGCCCGTCGCCGACAACGCGCTGGTGATCCAGGACACCCTGA
TCACCGCCGAGCGCGAGGCGCGACAGGCCCTGGGCACGTCGATCATCACGGCCGAGGACATCAAGCGCCACCCACCGGCC
AATGACCTGTCCGACATCATCCGCCGCGAGCCCGGGGTTAACCTGACCGGCAACAGTGCCAGTGGCGCACGCGGAAACAA
CCGGCAGATCGACCTGCGCGGCATGGGCCCGGAGAACACGTTGATCCTCATCGACGGCAAGCCATCCAGCGCGCGCAACG
CTGTGCGCTATGGCTGGAACGGTGACCGTGATACTCGGGGTGAAACCAATTGGGTGCCGGCCGAAGCGGTCGAGCGCATC
GAGATCCTGCGTGGCCCGGCCGCCGCACGCTACGGCTCCGGCGCCATGGGCGGGGTGGTCAATATCATCACCAAGCGTCC
TTCCGACGAGCTGAAAGGGAGCGTCAGCCTGTACACGCAACTGCCCGAAGACAGCGCAGAAGGCGCCAGCCGGCGAGCCA
ACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTGTGCGCCTGTACGGTGGCCTGGCCAAGACTGACGCCGACGAT
CTGGACATCAACGCCGGGCATGCCACCAGCGCTCTGGTTGCGGGGCGAGAAGGCGTTCGCAACAAGGACATCAACGGCCT
GCTCAGCTGGAAACTGAACGACGAGCACCGCCTCGAAGCCAGTGCCGGCTACAGCCGTCAGGGCAACATTTTTGCCGGCG
ACACCATGAACAGCAACGGCGGCGGAGACGTCGACTTCGTCTCCAGCCTCTACGGCCACGAAACCAACGTGATGCAGCGC
AGTACTTATGACCTGACCCACCTCGGTGATTTCACCTGGGGTACCAGCAAGACCACGCTGGCCTACGAATACGTACGCAA
CTGGCGCCTTAACGAGGGCTTGGCTGGCCGCACCGAAGGTGCCCCAAGCGACGAAGGTGGGGCCATGTCCCGTTTGCGTA
ACACACGCCTGAGCAGTGAGGTGAACCTGCCGTTCGCCATGGGCAGCACAGAACATGTGCTTACCTTGGGTGGCGAGTAC
CTGTACGAAACCCTCAACGACCAAGGTTCGTTGCGCCCGCAAAGCTCCGACCCCACCCACAATGACGGCCTTGTCGGCTT
CGATCGCAGCAGCTCGAAGATGACCGCACGCAGCTATGCGCTGTTTGTCGAAGACAACATCATCGTTGGCGACACCACCC
TTACGCCGGGCCTGCGTTTCGACCACCACGAAAGCTTCGGTGACAACTTCAGCCCCAGCCTGAACCTGTCGCACAAGCTG
ACCGAAGCGCTGTCGGTAAAAGGCGGCATCGCCCGTGCCTACAAGGTTCCGAACCTGTACCAGTCCAACCCCAACTACCT
GCTGTACAGCCGCGGTAATGGCTGCAGTGTGCAACAGGCCAACAATGGTGGCTGCTACCTGCAGGGCAACGCCGACCTCA
AGCCCGAGATCAGCGTCAACAAGGAAATCGGCCTGCTGTACGACCGTGGTACCTGGCGCACCAGTGCCACCTACTTCCGC
AACGACTACAAGAACAAGATCATCGGTGATACCGATGTACTTTACACCATGGGTACCGGCAGCCGTGTGACTCAGTGGGA
CAACGCCGGCAAGGCACGGGTGGAAGGTGTCGAAGGCAACTTCTTCATCGAGTTGGCCCCGACCCTGGACTGGAACACCA
ACCTGACCTGGATGCTCGACAACGATGATCGCGAAACGGGTGAGCCGCTGTCGGTGATCCCGGAATACACCGTCAACACC
AGCCTCGACTGGCGCGCGACCGAGCAGCTGTCATTCCAGGTAGCGGGTACTTACTTCGGCAAGCAAAAATCGCCGACCTA
CAACTACCGCACCCAGCAGGACTACGACAAGACCGCCCAGCAGGACGTCGACGCCTATGGCCTGGTGGACGTGAGCGCCG
GGTACAAGTTCAATGCCAACTACGACGTGCGGGTGGGCGTGAACAACGTCTTCGACAAGCAGATCCTGCGCGGCGGCAAC
GCCAGCAGCTCGGGGGCAAACACGTATAACCAGCCGGGCAGGGCGGTGTTTGCTGCGCTGAATATCAACTTCTGA

Protein sequence :
MQCRTSSNSLALAFVALASPSMLATAAESEELRAGEVVEAPVADNALVIQDTLITAEREARQALGTSIITAEDIKRHPPA
NDLSDIIRREPGVNLTGNSASGARGNNRQIDLRGMGPENTLILIDGKPSSARNAVRYGWNGDRDTRGETNWVPAEAVERI
EILRGPAAARYGSGAMGGVVNIITKRPSDELKGSVSLYTQLPEDSAEGASRRANFNLGGGLTDNLGVRLYGGLAKTDADD
LDINAGHATSALVAGREGVRNKDINGLLSWKLNDEHRLEASAGYSRQGNIFAGDTMNSNGGGDVDFVSSLYGHETNVMQR
STYDLTHLGDFTWGTSKTTLAYEYVRNWRLNEGLAGRTEGAPSDEGGAMSRLRNTRLSSEVNLPFAMGSTEHVLTLGGEY
LYETLNDQGSLRPQSSDPTHNDGLVGFDRSSSKMTARSYALFVEDNIIVGDTTLTPGLRFDHHESFGDNFSPSLNLSHKL
TEALSVKGGIARAYKVPNLYQSNPNYLLYSRGNGCSVQQANNGGCYLQGNADLKPEISVNKEIGLLYDRGTWRTSATYFR
NDYKNKIIGDTDVLYTMGTGSRVTQWDNAGKARVEGVEGNFFIELAPTLDWNTNLTWMLDNDDRETGEPLSVIPEYTVNT
SLDWRATEQLSFQVAGTYFGKQKSPTYNYRTQQDYDKTAQQDVDAYGLVDVSAGYKFNANYDVRVGVNNVFDKQILRGGN
ASSSGANTYNQPGRAVFAALNINF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroN CAC43424.1 IroN protein Virulence PAI III 536 Protein 4e-155 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_3496 YP_001268806.1 outer membrane receptor FepA VFG0935 Protein 3e-154 52
Pput_3496 YP_001268806.1 outer membrane receptor FepA VFG1650 Protein 2e-155 52
Pput_3496 YP_001268806.1 outer membrane receptor FepA VFG0923 Protein 1e-145 48