Gene Information

Name : Pput_5276 (Pput_5276)
Accession : YP_001270578.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Unknown
Product : transketolase domain-containing protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3959
EC number : -
Position : 5923476 - 5924324 bp
Length : 849 bp
Strand : -
Note : PFAM: Transketolase domain protein

DNA sequence :
ATGACTGTCAACGCACCCGACACTTCGCTCTCGGCGCTCGCCGAACGCGCGTACAACATTCGCCGCCACGCCCTGCGCAT
GGGGCAGGTCCAGGGCCAGGGTTATGTCGGCCAGGCCCTCGGCGCCGCTGACTTGCTGGCCGTGTCGTACTTCCATGCGC
TGCGCTATCAGCCCCACAACCCCGAATGGGAGCAACGCGACCGCTTTTACCTGTCCATCGGTCACTACGCCATCGCCCTG
TATGCAGCGCTGATCGAAGCCGGCGTGATCCCCCTGGAGGAACTGGAAACCTATGGTTCGGACGACAGCCGCCTGCCGAT
GTCGGGCATGGCCGCTTACACGCCGGGCATGGAAATAACCGGGGGGTCGCTCGGCCACGGCTTGGGCATAGCGGTCGGCG
CCTGCCTGGGCCTGAAACGCAAGAACTCGGATTCGTTTGTCTACAACCTGCTCTCGGACGGCGAATTGAACGAGGGTTCA
ACCTGGGAAGCCGCGATGTCGGCCTCACATTGGAAACTGAACAACCTCATCGCAATCGTCGACGTCAACAACCAGCAAGC
CGACGGCTACTCCAGCGAAGTGCTGGCCTTCGAGCCCATCGTTGACCGTTGGCAGGCGTTTGGCTGGTTTACCCAGCGCG
TGGACGGCAACGACATCGGCGCCCTGGTCGCCGCGTTCGACGCCGCACGCAACCATCAAGGGGCACAGCCGCGGGTCATC
ATCTGCGATACCAAGATGGGCAAGGGTGTGGACTTTCTCGAGTCACGTGAAAAAACCCACTTCATCCGCGTCGATGAAAA
CGAGTGGGATCTGGCATTGCAAAACCTTCAGGTCGGGAGAACTGTATGA

Protein sequence :
MTVNAPDTSLSALAERAYNIRRHALRMGQVQGQGYVGQALGAADLLAVSYFHALRYQPHNPEWEQRDRFYLSIGHYAIAL
YAALIEAGVIPLEELETYGSDDSRLPMSGMAAYTPGMEITGGSLGHGLGIAVGACLGLKRKNSDSFVYNLLSDGELNEGS
TWEAAMSASHWKLNNLIAIVDVNNQQADGYSSEVLAFEPIVDRWQAFGWFTQRVDGNDIGALVAAFDAARNHQGAQPRVI
ICDTKMGKGVDFLESREKTHFIRVDENEWDLALQNLQVGRTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96117.1 transketolase Not tested T-PAI Protein 2e-104 89
unnamed AAT96056.1 transketolase Not tested T-PAI Protein 8e-105 88
unnamed AAT96229.1 transketolase Not tested T-PAI Protein 6e-104 88
unnamed AAT96177.1 transketolase Not tested T-PAI Protein 4e-104 88
unnamed AAT96100.1 transketolase Not tested T-PAI Protein 4e-104 87