Gene Information

Name : Pput_0737 (Pput_0737)
Accession : YP_001266085.1
Strain : Pseudomonas putida F1
Genome accession: NC_009512
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 825422 - 825937 bp
Length : 516 bp
Strand : -
Note : TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2

DNA sequence :
ATGCAGATCAACGACACGCTCAAGCCCACCGAGGTCGCTCTGCTCTACCAGTCTCACCATGCCTGGTTGCGTGGTTGGTT
ACGCAGCCGGGTCGGTTGCAGTGAACATGCCGCAGACCTGGCCCAGGATACCTTCGTGCGGTTGTTGCGCGCCCGCCACG
TGTCGCCGCTCAAAGAACCGCGCGCCTACCTCAGCAGCATCGCCCGTGGCTTGATGATCGACCAGTTCCGCCGCCGCGCG
CTGGAGCGGGCCTACCAGGAGAGCCTGGCTCACCTGCCCGAAGCAGAAGTGCCCAGCGAAGAGGATAAGCTTGTCATCCT
CGATAGCCTGGAACGCCTCGACCGCGCCTTGCACCAGTTGAAACCGCGCGTCCGCCAAGCGTTCCTGCTGGCCCAGCTAG
ACGGTTTGAGCATCGTGCAGGTTGCCCAACGTCTGGAGGTGTCCAGGGCCACCGTTGAGCGCGATCTGGCGAAGGCCCTG
GGCGTCTGCTACCGGTTGCGCTATGCCGATGCCTGA

Protein sequence :
MQINDTLKPTEVALLYQSHHAWLRGWLRSRVGCSEHAADLAQDTFVRLLRARHVSPLKEPRAYLSSIARGLMIDQFRRRA
LERAYQESLAHLPEAEVPSEEDKLVILDSLERLDRALHQLKPRVRQAFLLAQLDGLSIVQVAQRLEVSRATVERDLAKAL
GVCYRLRYADA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 2e-33 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pput_0737 YP_001266085.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 6e-34 44