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Name : Pput_0897 (Pput_0897) Accession : YP_001266243.1 Strain : Pseudomonas putida F1 Genome accession: NC_009512 Putative virulence/resistance : Virulence Product : TonB-dependent siderophore receptor Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG4772 EC number : - Position : 1020040 - 1022469 bp Length : 2430 bp Strand : + Note : TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB, short N-terminal domain; TonB-dependent receptor, plug DNA sequence : GTGAACAACAACAAACCTCTCCCACGCTTTCGCGCCCTGGCGCTGGCCCTGGCGGTCAGTACTGTGGCCGTTGGCAGCCA GGCCGCAGAGGCCGCTAATGCCCTCCACATCCAGGCCCAGCCATTGGGTTCGGCGCTGAACCAGCTCGGCCAGCAAACCA GCCTGCAGCTGTTTTTCAGCCCCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTGGCGCCGGTGCAG GCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTACGAGATGTCCGGGGACACCGTTGTGGTGAAGCCTCTGCCGAC TACCCTTGACCTGGGCAGCGGCAGCCTGGAGCTGGCCCCCACCGACATCAAGGTGGTCGGTGACTGGCTGGGTGATGCCC AGCAGAGCGTGGTACAGAACCACCCTGGGGCACGCACCGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAAC GTGCGCGACGTGCTGCGCGGCATCCCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAA CGTGGGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGC CGTATGGCCAGCCACAGCTGTCGATGGCACCGATTTCTTCTGGCAACCTCGACAGCATCGACGTCGTGCGCGGTGCCGGC TCGGTGCGCTATGGCCCGCAGAACGTGGGCGGCGTGATCAACTTTGTAACCCGGGCGATTCCGGAAAAGGCCTCGGCAGA GCTGTCCACCACCCTGGAGACCTCCCAGCACGGTGGCTGGAAACATACCGAGTCAGCCTTCGTCGGTGGCACGGCCGACA ATGGCATGGGCGTGGCGCTGCTGTACACCGGGGTGAATGGCAACGGTTACCGTGAAAGCAACAACGGCAACGACATCGAC GACGTAATCCTCAAGACGCATTGGGCGCCAACCGATGTTGATGAGTTCTGGCTGAACTTCCATTATTACGATGGCCGTGC CGACATGCCGGGTGGCCTGACCCAGGCCCAATACGACAGCAACCCGTACCAGTCGCTGCGCGATTACGACTACTTCGCGG GCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACC GACAGCTTCCGCGGCAGCACCATCGCCTCGCGGGACATGAAGACGTTGTCGTCGTACCCGCGCAACTACCACACCTTTGC CATCGAACCCCGTGTGTCGCGCATCTTCTTTGCCGGCCCAACCACCCAGGAAGTCAGTGTCGGGTACCGTTACCTGAAGG AAGCGATGCGTGAACAATCGACTCGCCTGGCGCTGATCGACAACGTGCCGACGGTGACCCCGACTTCCGACGGCCACGTG TTCCAGGACCGCAGTGGCGGCACCGAGGCCAGCGCCTACTACATCGACGACAAGATCGACGTGGGCAACTGGACCATCAC CCCTGGCGTGCGCTTCGAGCACATCAATACCGACTGGCGCGACCGCCCGGTGCTGGACGCCAACAACCGCCCGGTAGCCG AGAAGAAGCGCAGCATCACCAGCGACGAGCCTTTGCCGGCACTGAGCGTGATGTACCACGTTTCCGATGCCTGGAAGGTG TTCGCCAACTACGAGACTTCGTTCGGTAGCCTGCAGTACTTCCAGCTGGGCCAGGGCGGTTCTGGCAACAGTACGGCCAA TGGCCTGGAGCCGGAAAAAGCCAAGACCTACGAAATCGGTACCCGTTATGACAATGGCGGCTTTGCCGGTGAGCTGACGG CGTTCTACATCGACTTTGATGATGAGCTGCAGTACATCAGCAACGACGTGGGCTGGACCAACCTCGGTGCGACCAAGCAC CAGGGCATCGAGGCTTCGGTGCGTTATGACCTGGCCGGGCTGGACCCGCGCCTGGACGGGCTGTCGGTGAGCGGTGGCTA CACCTATACCCGCGCGACCTATGAAGGGGATATCCCAGGGTTCAAGGGCCGAGACCTGCCGTTCTATTCACGCCAGGTGG CCACTGCCGGGGTGCGTTACGCAGTTAACCGCTGGACCTGGAACCTGGACGCCTATGCCCAATCGAAGCAGCGTGCGCCG GGAACCGGGATCAATGCCGATGGCAGTTTCAATGGCGACTACATCACCGAGCCGAGTGCTGACGGGCAGTATGGCGATAT TCCGGGTTATGTGACCTGGCATGCCCGCGGTGGGTACGAATTCGGGCCTGAACTGTCCAACCTGAAGCTGGCGGCGGGGG TGAAGAACCTGTTCGACAAGCAGTACTTCACCCGCTCCAGTGACAACAATGCCGGCCTTTACGTGGGTGAGCCGCGAACC TTCTACGTGCAGGCCAGTGTTGGGTTTTGA Protein sequence : MNNNKPLPRFRALALALAVSTVAVGSQAAEAANALHIQAQPLGSALNQLGQQTSLQLFFSPELVAGKQAPAVSGNLAPVQ ALQQLLQGSGLTYEMSGDTVVVKPLPTTLDLGSGSLELAPTDIKVVGDWLGDAQQSVVQNHPGARTVVRREAMVEKGAMN VRDVLRGIPGVQVQDSNGTGGSDLSLNVGVRGLTSRLSPRSTVLIDGIPAAFAPYGQPQLSMAPISSGNLDSIDVVRGAG SVRYGPQNVGGVINFVTRAIPEKASAELSTTLETSQHGGWKHTESAFVGGTADNGMGVALLYTGVNGNGYRESNNGNDID DVILKTHWAPTDVDEFWLNFHYYDGRADMPGGLTQAQYDSNPYQSLRDYDYFAGRRKDVSFKWQRQLDDATQFEVLTYYT DSFRGSTIASRDMKTLSSYPRNYHTFAIEPRVSRIFFAGPTTQEVSVGYRYLKEAMREQSTRLALIDNVPTVTPTSDGHV FQDRSGGTEASAYYIDDKIDVGNWTITPGVRFEHINTDWRDRPVLDANNRPVAEKKRSITSDEPLPALSVMYHVSDAWKV FANYETSFGSLQYFQLGQGGSGNSTANGLEPEKAKTYEIGTRYDNGGFAGELTAFYIDFDDELQYISNDVGWTNLGATKH QGIEASVRYDLAGLDPRLDGLSVSGGYTYTRATYEGDIPGFKGRDLPFYSRQVATAGVRYAVNRWTWNLDAYAQSKQRAP GTGINADGSFNGDYITEPSADGQYGDIPGYVTWHARGGYEFGPELSNLKLAAGVKNLFDKQYFTRSSDNNAGLYVGEPRT FYVQASVGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fecA | AAL08456.2 | FecA | Not tested | SRL | Protein | 3e-137 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pput_0897 | YP_001266243.1 | TonB-dependent siderophore receptor | VFG1047 | Protein | 2e-137 | 44 |
