Gene Information

Name : RoseRS_0168 (RoseRS_0168)
Accession : YP_001274554.1
Strain : Roseiflexus sp. RS-1
Genome accession: NC_009523
Putative virulence/resistance : Unknown
Product : class V aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1104
EC number : -
Position : 211514 - 212743 bp
Length : 1230 bp
Strand : -
Note : PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase

DNA sequence :
ATGTCTCTACAAAGCGAGGAGTATGTGACTGACCGATTGATCTACCTTGATCACGCGGCAACGACGCCGGTCGATCCCGT
GGTGCTCGAGGCGATGATCCCCTATTTCACCACGCACTTTGGCAATCCATCGAGCATCTATCGCATTGGACGCGCTGCAC
TGCATGCACTCGACGAAGCGCGTGATCAGATTGCGTCGATCCTGGGAGCATCGCCGCGTGAGATTATTTTTACCGGCAGT
GGTTCGGAGAGCGATAACCTTGCGATTCGTGGCGTCGCACTGGCGCAACGCCAGGCAGGACGGGGATCGCACATTATTAC
CAGCGCCATTGAGCATCACGCGGTGCTGCATACCGTCGAACATTTGCAAGCGTTTGGGTTCGAGGCGACCATCCTGCCGG
TCGATCCCAAAGGTCTGGTGCAGCCGGAATACCTGCGCGCCGCGTTGCGTCCGGACACGGTGCTGGTATCGATCATGTAC
GCCAACAACGAAATCGGCACGATCCAGCCGATTGCGGAACTGGGCGCCATCTGTCGCGAACGCGGCATTCCTTTCCACAC
CGATGCCGTCCAGGCGCCCGGTGCGTTACCGCTCGACGTGCGTGCGCTCAACGTCGATCTTATGACCATTGCTGCGCACA
AGTTCTACGGTCCCAAAGGCGTGGGTGCGCTCTACGTTCGCCGGGGCACACCGCTCCTGCCGCAGATCACCGGCGGTGGA
CAGGAACGACGACGACGCGCTGGCACCGAGAATGTGCCCGGCATCGTCGGCATGGCGACGGCGCTGCGCCTGGCGGAAGA
ACGCCGCGCGCACGACAGCGCCCACTGTGCGCGTCTGCGCGACCGGTTGGTGGCGGGCATTCTGGAACGTGTGCCGGGAT
CGCGTCTCAATGGTCATCCGACCCAACGACTGCCCAATAATGCCAGTCTTTCGTTCGAGGGTGTCGAGGGTGAAAGCATC
CTTCTGTTGCTCGATCAGCACGGGATTGCTGCTTCGAGCGGCTCTGCCTGCACCAGTGGATCACTGGAGCCATCGCACGT
GTTGATCGCCCTGGCTCGCGCTTCCGGGACGGAACGTGCGCCGGAAATTGCGGCTGCGCTCCCCGGCGCGGTGCGATTCA
CTTTTGGGCGTGAGAACACCGATGCCGATGTCGATGCGGTTCTGGAGATGTTGCCGGGTATTGTTGCACAACTGCGGGAA
ATGACGGTAACATCGCAGGGAGGCGTATGA

Protein sequence :
MSLQSEEYVTDRLIYLDHAATTPVDPVVLEAMIPYFTTHFGNPSSIYRIGRAALHALDEARDQIASILGASPREIIFTGS
GSESDNLAIRGVALAQRQAGRGSHIITSAIEHHAVLHTVEHLQAFGFEATILPVDPKGLVQPEYLRAALRPDTVLVSIMY
ANNEIGTIQPIAELGAICRERGIPFHTDAVQAPGALPLDVRALNVDLMTIAAHKFYGPKGVGALYVRRGTPLLPQITGGG
QERRRRAGTENVPGIVGMATALRLAEERRAHDSAHCARLRDRLVAGILERVPGSRLNGHPTQRLPNNASLSFEGVEGESI
LLLLDQHGIAASSGSACTSGSLEPSHVLIALARASGTERAPEIAAALPGAVRFTFGRENTDADVDAVLEMLPGIVAQLRE
MTVTSQGGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 4e-58 46