Gene Information

Name : PsycPRwf_2166 (PsycPRwf_2166)
Accession : YP_001281056.1
Strain : Psychrobacter sp. PRwf-1
Genome accession: NC_009524
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 2703298 - 2704086 bp
Length : 789 bp
Strand : +
Note : TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein

DNA sequence : 
ATGCCAAACGCTAATTTATCACCTCAAAACCCGGGCTTTTTTTCACGCCTATGGCAGGGCTTTTTGGCCACTGTTGGTAC
CCGTGAATTCTTTCGTATCTTCACGCCTTGGGTAAAGTGGCTGGCGGCATTGGCCACTATTATGTTGGTAGTCGGCAGTG
TTTGGGGGCTGGCCTTTGCGCCACCTGATTATCTACAAGGCAACAGCTATCGCATTATTTTTATCCATGTGCCTGCTGCC
GGTATCGCCTTATCTATTTATTTTGCGCTTGCGGTACTGGGCGTGATATTTTTGGTGTGGCGTATTAAGACCGCCAACCT
AGTGGCTCAAGCAATCGCCCCCATCGGATTTATGCTGTGTGTTTTAAGTTTAATAACAGGATCAATTTGGGCCAAGCCGA
CCTGGGGTACTTTTTGGGTATGGGATGCTCGCCTGACCTCGATGCTGATTTTAGCGTTTTTATACGCAGGTGTGATGGCG
CTATTTGCCGCCTTTGAGCATTCACCAAACCGCGGCAAAGCTGCTGCTATTTTATCGATTGTGGGCGCAGTTAACCTGCC
CATTATCAAGTACTCAGTAAACTGGTGGAACACCCTACACCAAGGCTCTACCATTACCCTCACTGAAGCACCAAAGATGT
CATTAGATATGTTGGCGCCTTTACTATTGATGATTATTGGTAGCTACCTGTTGGTGGCCGCCTTAGCCATTTATCGCACC
AACACCCTTATCCTACGCCGCGATCAAAATAAGGCTTGGGTCAAAGAATATGTGCGTGACGCCAAATAA

Protein sequence : 
MPNANLSPQNPGFFSRLWQGFLATVGTREFFRIFTPWVKWLAALATIMLVVGSVWGLAFAPPDYLQGNSYRIIFIHVPAA
GIALSIYFALAVLGVIFLVWRIKTANLVAQAIAPIGFMLCVLSLITGSIWAKPTWGTFWVWDARLTSMLILAFLYAGVMA
LFAAFEHSPNRGKAAAILSIVGAVNLPIIKYSVNWWNTLHQGSTITLTEAPKMSLDMLAPLLLMIIGSYLLVAALAIYRT
NTLILRRDQNKAWVKEYVRDAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 8e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PsycPRwf_2166 YP_001281056.1 heme exporter protein CcmC VFG1856 Protein 1e-44 43