Gene Information

Name : CGSHiEE_05325 (CGSHiEE_05325)
Accession : YP_001290824.1
Strain : Haemophilus influenzae PittEE
Genome accession: NC_009566
Putative virulence/resistance : Resistance
Product : outer membrane-specific lipoprotein transporter subunit LolE
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1069456 - 1070139 bp
Length : 684 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAATAACTATTTATTAAAATGCGAAAATATCAATAAATTTTATCAAGAAGGCGAAAATCAAACGCAAGTGTTAAAAGG
CGTTTCTTTTTCTATGGAACCTGCAGAATTGGTTGCGATTGTGGGAAGTTCAGGTTCAGGGAAAAGTACGTTATTGCATA
CTTTAGGGGGACTTGATCAGCCAAGTAGTGGGGAAGTGTTTATTAATGGACAATCCTTGCAAAAAGCATCGGCTAATGAA
TTAGCTGCTTTGCGTAATCGTTATTTAGGATTTGTATATCAATTTCATCATTTAATGGCGGATTTTACCGCACTTGAAAA
TGTGATAATGCCGATGTTGATTGGTCATCAAAATAAAGCAGAAGCGAAAGATCGCGCCGAAAAAATGCTAAGTGCGGTGG
GATTAAGTCATAGAATTACCCATCGTCCTTCTGCGCTTTCTGGTGGGGAACGTCAGCGTGTGGCGATTGCGCGTGCTTTA
GTGAATAATCCATCGTTAGTTTTAGCGGATGAACCCACAGGAAATCTTGATCACAAGACCACTGAAAGTATTTTTGAGCT
GATTCAACAACTTAATCAAGAACAAAATATCGCTTTTTTATTAGTCACTCACGATATGGGGCTTGCGGAAAAATTATCAC
GCCGTTTAGTGATGCAAGACGGCATTTTGAAGGAAGGTGCATAA

Protein sequence : 
MNNYLLKCENINKFYQEGENQTQVLKGVSFSMEPAELVAIVGSSGSGKSTLLHTLGGLDQPSSGEVFINGQSLQKASANE
LAALRNRYLGFVYQFHHLMADFTALENVIMPMLIGHQNKAEAKDRAEKMLSAVGLSHRITHRPSALSGGERQRVAIARAL
VNNPSLVLADEPTGNLDHKTTESIFELIQQLNQEQNIAFLLVTHDMGLAEKLSRRLVMQDGILKEGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CGSHiEE_05325 YP_001290824.1 outer membrane-specific lipoprotein transporter subunit LolE NC_012469.1.7686878. Protein 3e-39 45
CGSHiEE_05325 YP_001290824.1 outer membrane-specific lipoprotein transporter subunit LolE NC_008702.1.4606598. Protein 2e-37 44
CGSHiEE_05325 YP_001290824.1 outer membrane-specific lipoprotein transporter subunit LolE CP001581.1.gene798.p Protein 5e-39 41