Gene Information

Name : bioD (CGSHiGG_00210)
Accession : YP_001291548.1
Strain : Haemophilus influenzae PittGG
Genome accession: NC_009567
Putative virulence/resistance : Resistance
Product : dithiobiotin synthetase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 6.3.3.3
Position : 32095 - 32778 bp
Length : 684 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAATAACTATTTATTAAAATGCGAAAATATCAATAAATTTTATCAAGAAGGCGAAAATCAAACGCAAGTGTTAAAAGG
CGTTTCTTTTTCTATGGAACCTGCAGAATTGGTTGCGATTGTGGGAAGCTCTGGTTCAGGGAAAAGTACTTTATTACATA
CTTTGGGTGGCTTAGATCAGCCAAGTAGTGGGGAAGTGTTTATTAATGGACAATCCTTGCAAAAAGCATCGGCTAATGAA
TTAGCTGCTTTGCGTAATCGTTATTTAGGATTTGTGTACCAATTCCATCATTTGATGGCGGATTTTACCGCACTTGAAAA
TGTGATGATGCCGATGTTGATTGGTCATCAAAATAAAACTGAAGCGAAAGATCGCGCTGAAAAAATGCTAAGTGCGGTGG
GATTAAGTCATAGAATTACCCATCGTCCTTCAGCGCTTTCTGGTGGGGAACGTCAGCGTGTGGCGATTGCGCGTGCTTTA
GTGAATAATCCATCGTTAGTTTTAGCGGATGAACCCACAGGAAATCTCGATCACAAGACCACTGAAAGTATTTTTGAGCT
GATTCAACAACTTAATCAAGAACAAAATATCGCCTTTTTATTAGTCACTCACGATATGGGGCTTGCGGAAAAATTATCAC
GCCGTTTAGTTATGCAAGATGGTCTTTTGAAGGAGGGGGCGTGA

Protein sequence : 
MNNYLLKCENINKFYQEGENQTQVLKGVSFSMEPAELVAIVGSSGSGKSTLLHTLGGLDQPSSGEVFINGQSLQKASANE
LAALRNRYLGFVYQFHHLMADFTALENVMMPMLIGHQNKTEAKDRAEKMLSAVGLSHRITHRPSALSGGERQRVAIARAL
VNNPSLVLADEPTGNLDHKTTESIFELIQQLNQEQNIAFLLVTHDMGLAEKLSRRLVMQDGLLKEGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
bioD YP_001291548.1 dithiobiotin synthetase NC_012469.1.7686878. Protein 5e-39 45
bioD YP_001291548.1 dithiobiotin synthetase NC_008702.1.4606598. Protein 2e-37 43