Gene Information

Name : lolD (FP0921)
Accession : YP_001295832.1
Strain : Flavobacterium psychrophilum JIP02/86
Genome accession: NC_009613
Putative virulence/resistance : Resistance
Product : Lipoprotein releasing system ATP-binding protein LolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 1290039 - 1290719 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGATACAAAAAGAACTTTTATTACAAGCAAAAAATGTAAGTAAATATTTTTATGAACCTGAAAAATTTAAGGTTCTAAA
TAATATTTCATTCGATATACATAAGGGCGAATTTGTAACTATGGTAGGAAAATCGGGTTCAGGAAAATCAACTTTACTAT
ACCTTCTTTCTACAATGGACACAGATTATGAAGGAAATATTTTTTTTGATAGCGAAAATTTAACCCACAAAACAAAAGAA
GAATTAGCCGCAATACGCAACGAGAAAATAGGTTTTGTTTTTCAGTTTCATTATTTATTACCTGAATTCTCGAGTTTAAA
AAATGTCATGATACCAGCATTAAAACTAGGCAAATATTCTAAACCAGAAATTGAAGAAAGAGCCTATTCGATTCTAACAA
AATTAGATTTAAAAGACCAAGCACTTAAACCTGCTAACAAACTCTCAGGGGGACAACAACAACGTGTAGCCATTGCAAGA
GCTTTAATAAATGATCCCAAAATTATTATGGGAGATGAGCCAACAGGCAATTTAGATAGTAAAAATGCAGCTATTGTTTT
CGATTTATTTAAGCAACTTACAACCCAATTCGACCAAACTGTTCTTGCCGTAACCCACGATAATGATTTTGCCAAAGCTA
GTGATCGCATTATTGAAATGGCTGATGGGATAATTTTATAA

Protein sequence : 
MIQKELLLQAKNVSKYFYEPEKFKVLNNISFDIHKGEFVTMVGKSGSGKSTLLYLLSTMDTDYEGNIFFDSENLTHKTKE
ELAAIRNEKIGFVFQFHYLLPEFSSLKNVMIPALKLGKYSKPEIEERAYSILTKLDLKDQALKPANKLSGGQQQRVAIAR
ALINDPKIIMGDEPTGNLDSKNAAIVFDLFKQLTTQFDQTVLAVTHDNDFAKASDRIIEMADGIIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_001295832.1 Lipoprotein releasing system ATP-binding protein LolD CP001581.1.gene598.p Protein 9e-39 44
lolD YP_001295832.1 Lipoprotein releasing system ATP-binding protein LolD CP001581.1.gene798.p Protein 1e-37 42