Gene Information

Name : rnhA (FP0198)
Accession : YP_001295134.1
Strain : Flavobacterium psychrophilum JIP02/86
Genome accession: NC_009613
Putative virulence/resistance : Unknown
Product : Ribonuclease HI
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 252870 - 253349 bp
Length : 480 bp
Strand : -
Note : -

DNA sequence :
TTGAATTACCAAGTACACATATATACCGATGGCGCTGCCAAAGGAAACCCAGGCCCAGGAGGCTATGGCGTTGTAATGGA
ATTAGTTGGCACTGCTTTCAAAAAAGAGTTTTATGAGGGTTTTAGACACACCACAAATAACCGTATGGAATTGTTGGCAG
TAATTGTTGGTTTAGAAAAACTTAAAAACCCAAACATGAAGGTTTTAGTAGTTTCGGATTCTAAATACGTGGTAGATTCT
GTCGAGAAAAAATGGGTTTTAGGCTGGGAAAAAAAAGGCTTTAAAGACCGAAAAAATTCCGATTTATGGAAACGCCTACT
CATTATTTACAGAAAACACCAAGTCGATTTTAAATGGATAAAAGGGCACAACAGCCATCCGCAAAACGAAAGATGCGATC
AATTAGCCGTTTTTGCATCAAACCAAAAAACACTTTCGGTTGATGCTTTTTACGAGAAAGAAGAAGCAAAACTATTATAA

Protein sequence :
MNYQVHIYTDGAAKGNPGPGGYGVVMELVGTAFKKEFYEGFRHTTNNRMELLAVIVGLEKLKNPNMKVLVVSDSKYVVDS
VEKKWVLGWEKKGFKDRKNSDLWKRLLIIYRKHQVDFKWIKGHNSHPQNERCDQLAVFASNQKTLSVDAFYEKEEAKLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 4e-21 41