Gene Information

Name : Cbei_0485 (Cbei_0485)
Accession : YP_001307629.1
Strain : Clostridium beijerinckii NCIMB 8052
Genome accession: NC_009617
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 585491 - 586909 bp
Length : 1419 bp
Strand : -
Note : TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; KEGG: cpf:CPF_2404 pyruvate kinase

DNA sequence :
ATGCAAAAAACAAAAATGATTTTTACTATTGGTCCAGCAAGCGATAATGAGGAGACTTTAAGAAAGTTCATTGAAATTGG
GATGAGCGCTGCAAGATTAAACTTTTCTCATGGTACACATGAAACACACAAAGAAAAAATCGAACTAATCCAACGCCTAA
GTAAAGAAATGAATTCTGCAACAGCTATAGTTCTTGATATTAAAGGTCCAAAAATCAGAACTCATAACTTTGTAAACGAT
GGTGTAACTCTTAATGACGGTGACGATTTCGATTTCATATGTGGTGAAGAAATTCTTGGTGATGAGAAAAGATGCTCAAT
CTCATATGATGTACTTTATCAAGATATAAAAGTTGGCGGAAAAATTCTTGTTGATGATGGCCTTCTAAAATTTAAAGTTA
CTGGTGTTGAAGGCAAAACAATTCATACAAAAGTTGTTGTAGGTGGTGAAATTAAAAATCATAAGGGCGTAAATGTACCT
AATGTAGTTATTAAATTACCATCAATTACAGAAAAAGATATAGAAGATATAAAATTCGGATGCAAAATGGGCGTTGATTT
TATTGCTGCATCTTTCATAAGAAAAGCCAGTGATATCTTAGATGTAAAGAAAGTTCTAAAAGAAAACCATGGGGAACATA
TAAAAGTAATAGCTAAAATCGAAAACCAAGAAGGTGTAGATAATATAGATTCTATCATCGAAGTAACTGACGCTGTAATG
GTTGCCAGAGGAGATATGGGTGTTGAAATTCCAATTCAAAAAGTGCCTATAATACAAAAAATGATAATTAGAAAATGTAA
TGAAGCTGGTAAAGTTGTTATAACTGCAACTCAAATGCTTGATTCAATGATTAGAAATTCACTTCCAACTAGAGCTGAAG
CTAGTGATATTTGTAACGCTATTTTTGATGGAACTGATGCAATCATGTTAAGTGGAGAAAGTGCTTCTGGTTGTTTCCCT
ATAGAAGCAGCAAAGACAATGTCAAAAATTGCTCAAGAAGCTGAAGAATACTTAGATTATAATCACTTAACTGCAAGACT
TAGAGAACCATCACTTACTGACTACGCAGCTGCAATAAGTTATTCAGCATGTAGAACAGCTAACATCTTACATGCAAAAG
CTATAGTGGCAGCAACAAAGAGCGGTGCTACTGCAAGACTACTTTCAAGATACAGATCAAAGGCTCCAATCATAGCTATA
ACACCTTACGAACAAGTAAGAAAAGGATTAAGCTTAAACTTTGGAATCTTCCCAATGCCTTGTAAAATGTTTAACTCAAC
AGATGAAATATTAACAGAAGCTAAAAACACAGTATTTAGTCTAAATTTCACACAACCAGGAGACGATATAATAGTTGCTG
CAGGAATGCCAACAACTCAAACTGGCGGAACTAATATGTTAAAAATAGAAAAGATTTAA

Protein sequence :
MQKTKMIFTIGPASDNEETLRKFIEIGMSAARLNFSHGTHETHKEKIELIQRLSKEMNSATAIVLDIKGPKIRTHNFVND
GVTLNDGDDFDFICGEEILGDEKRCSISYDVLYQDIKVGGKILVDDGLLKFKVTGVEGKTIHTKVVVGGEIKNHKGVNVP
NVVIKLPSITEKDIEDIKFGCKMGVDFIAASFIRKASDILDVKKVLKENHGEHIKVIAKIENQEGVDNIDSIIEVTDAVM
VARGDMGVEIPIQKVPIIQKMIIRKCNEAGKVVITATQMLDSMIRNSLPTRAEASDICNAIFDGTDAIMLSGESASGCFP
IEAAKTMSKIAQEAEEYLDYNHLTARLREPSLTDYAAAISYSACRTANILHAKAIVAATKSGATARLLSRYRSKAPIIAI
TPYEQVRKGLSLNFGIFPMPCKMFNSTDEILTEAKNTVFSLNFTQPGDDIIVAAGMPTTQTGGTNMLKIEKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-87 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-87 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-86 44
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-87 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cbei_0485 YP_001307629.1 pyruvate kinase VFG0479 Protein 8e-88 44