Gene Information

Name : Smed_6064 (Smed_6064)
Accession : YP_001314648.1
Strain :
Genome accession: NC_009621
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1006607 - 1006810 bp
Length : 204 bp
Strand : +
Note : PFAM: Cold-shock protein DNA-binding; Ribonuclease B OB region domain; SMART: Cold shock protein; KEGG: sme:SMa0738 probable CspA6 cold shock protein transcriptional regulator

DNA sequence :
ATGGCAACTGGCACCGTAAAATTCTTCGCCCAAGACAAGGGCTTTGGCTTCATTACCCCTGACAGTGGCGGCCCAGACGT
ATTCGTTCACATCTCGGCGCTCGGTTTTGCCGGTTCTCTTCAGGATGGCCAGAAGGTCAGCTACGAGCTGGGACAAGACC
GCAAGACCGGCAAGTCGAAAGCCGAGAACGTCAGTGCTCTTTGA

Protein sequence :
MATGTVKFFAQDKGFGFITPDSGGPDVFVHISALGFAGSLQDGQKVSYELGQDRKTGKSKAENVSAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 9e-08 50