Gene Information

Name : Amet_1296 (Amet_1296)
Accession : YP_001319160.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1348710 - 1348910 bp
Length : 201 bp
Strand : -
Note : PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: lwe:lwe2036 cold shock-like protein

DNA sequence :
ATGAAAACAGGTACAGTAAAATGGTTTAACTCAGAAAAAGGATTTGGATTTATCGAAGTAGAAGGTGGAGATGACGTATT
CGTACATTTCTCAGCAATCACTGGAGACGGATTCAAAACATTAGAAGAAGGACAAAAAGTTGAATTCAACGTAGTTGAAG
GAAACAGAGGACCTCAAGCTGAGAACGTAGCTAAATTATAG

Protein sequence :
MKTGTVKWFNSEKGFGFIEVEGGDDVFVHFSAITGDGFKTLEEGQKVEFNVVEGNRGPQAENVAKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-14 60
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 0.001 41