Gene Information

Name : Amet_1688 (Amet_1688)
Accession : YP_001319523.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1789630 - 1790397 bp
Length : 768 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lwe:lwe2133 ABC transporter, ATP-binding protein

DNA sequence : 
ATGGAATACGTATTAAAAGTAAACAAAGTAGAAAAAACATATGGAAGAGGAGCTAATACTTTCAATGCACTTAAAAATAT
AACCTTTGCAATTGAAGAAGGGGAGTTTGTGGGAATAATGGGACCATCAGGAGCTGGGAAATCTACATTATTAAATTTAC
TGGCAACTATCGATTATCCAACCAGTGGAGATATTTTTATTAAACAAGATAACATTGTCAAGATGACAGAGGATCAGTTA
GCCGAATTTCGGCGAGAGAACTTAGGGTTTATTTTTCAAGACTATAATTTACTTGACTCCTTAACGGTAAGAGAAAATAT
TCTATTACCACTTGCAATTAAAAAAAGACCAGCAAAGGAAATTAATGAAAAGGTAATCTCTATAGCCAAAATATTTGATA
TTGAAGATCTTTTAGATAAATATCCTTATCAAATTTCTGGAGGAGAAAAGCAACGAACAGCTTCATCTCGTGCATTGATA
ACTAATCCCAAACTGTTATTTGCAGATGAGCCAACGGGAGCACTGGATTCAAAGTCAGCTACAGAGTTGTTGGAAAAGCT
AAGCACTTTAAATATAGAGCAACAAGCAACGATTATGATGGTTACACATGATGCCTATGCTGCTAGTTTTTGTCGACGAA
TAATTTTCATTAAAGACGGTCAATTATCAAATGAAATAACCCGTGGAAATTCTACTCGTAAAGATTTTTTTCAACTCATA
TTGGATGAGCTATCGTATTTAGGTGGTGCTGATAATGACATTAATTGA

Protein sequence : 
MEYVLKVNKVEKTYGRGANTFNALKNITFAIEEGEFVGIMGPSGAGKSTLLNLLATIDYPTSGDIFIKQDNIVKMTEDQL
AEFRRENLGFIFQDYNLLDSLTVRENILLPLAIKKRPAKEINEKVISIAKIFDIEDLLDKYPYQISGGEKQRTASSRALI
TNPKLLFADEPTGALDSKSATELLEKLSTLNIEQQATIMMVTHDAYAASFCRRIIFIKDGQLSNEITRGNSTRKDFFQLI
LDELSYLGGADNDIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amet_1688 YP_001319523.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-38 43
Amet_1688 YP_001319523.1 ABC transporter-like protein CP001581.1.gene598.p Protein 1e-38 41