Gene Information

Name : Amet_0260 (Amet_0260)
Accession : YP_001318152.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 299934 - 300218 bp
Length : 285 bp
Strand : +
Note : PFAM: microcompartments protein; KEGG: lwe:lwe1138 propanediol/ethanolamine utilization protein

DNA sequence : 
ATGGCAATTTCAAACGCGTTAGGAATGATTGAAACAAAAGGATTAGTAGGTGCAATTGAGGCAGCAGATGCAATGGTGAA
GGCTGCAAATGTAACATTATTAGGTAAAGAACATGTTGGTGGTGGTTTAGTCACAGTAATGGTAAGAGGAGATGTTGGTG
CAGTTAAAGCGGCAACAGATGCTGGAGCCGCAGCTGCAGAGAGAGTGGGAGAACTAATGTCTGTACACGTGATTCCAAGA
CCTCATGGTGAAGTGGAAACGATTCTTCCGCAAATCAAAGAATAA

Protein sequence : 
MAISNALGMIETKGLVGAIEAADAMVKAANVTLLGKEHVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGELMSVHVIPR
PHGEVETILPQIKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-15 65
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 6e-16 61
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-13 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amet_0260 YP_001318152.1 microcompartments protein VFG1596 Protein 6e-16 65
Amet_0260 YP_001318152.1 microcompartments protein VFG1597 Protein 2e-16 61
Amet_0260 YP_001318152.1 microcompartments protein VFG1598 Protein 4e-14 58