Gene Information

Name : Amet_3837 (Amet_3837)
Accession : YP_001321613.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 3952399 - 3952701 bp
Length : 303 bp
Strand : -
Note : PFAM: microcompartments protein; KEGG: dde:Dde_3284 carbon dioxide concentrating mechanism protein (PduA related)-like

DNA sequence : 
ATGAATAATTACAAAGCCTTGGGTTTAATCGAAACCTTTGGGATTGTTTTCGTACTAGAAGCAGCGGATGCCATGTGTAA
AGCAGCAGATGTGGATCTAATTGGATTTGAAAATGTGGCGTCGGGTTATATTTCTGTTCTGGTTAGAGGGGATGTAGGAG
CTTGTAAAGCTGCAGTAGAAAGTGGGATAAGAGCAGTTAAAGAAATGGGGTCTGAGGTTTATAGTTCTTTAGTAATTCCT
AGTCCCCATCATGATATTGAAAAAATCATTTCCCGTTACAGCCTAGAAACACTTAATCCATAA

Protein sequence : 
MNNYKALGLIETFGIVFVLEAADAMCKAADVDLIGFENVASGYISVLVRGDVGACKAAVESGIRAVKEMGSEVYSSLVIP
SPHHDIEKIISRYSLETLNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-18 62
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-20 62
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-19 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amet_3837 YP_001321613.1 microcompartments protein VFG1596 Protein 7e-19 62
Amet_3837 YP_001321613.1 microcompartments protein VFG1597 Protein 1e-20 62
Amet_3837 YP_001321613.1 microcompartments protein VFG1598 Protein 2e-19 57