Gene Information

Name : Amet_3842 (Amet_3842)
Accession : YP_001321618.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Virulence
Product : iron-containing alcohol dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1454
EC number : -
Position : 3956057 - 3957211 bp
Length : 1155 bp
Strand : +
Note : PFAM: iron-containing alcohol dehydrogenase; KEGG: cno:NT01CX_0486 alcetaldehyde dehydrogenase or NADPH-dependent butanol dehydrogenase

DNA sequence : 
ATGAATCAATTCAAAATAGATTCTATGATTTACTTTAATGATGACGAATCAGAATCATTAGAATTTCTAAAAGGTATTAA
GGGAGAAAAAGCTTTCATTGTTGCAGATTCCATCATGGACAAGCTAGGCTACTTAGAAAAAACAATTTCACATCTTAAGC
ATGCTAAAATTACTTGCTCAGTTTTCACTGGAGTAAAACCCGATCCAGACACGAGTACAATTAGTAATGGAATTAAAGAG
TACAAAAAAACAGATGCCGATATCATTATCGCATTGGGAGGAGGTTCTGCTATTGATACGGCAAAGGCAATTATTTATTA
TTCTGCTAAATTATCTGATAACCACTTGTCAAAACATAAGCCTCTTTTTATTGCAATTCCTTCTACCAGTGGAACCGGTT
CAGAAGTTACTGATTTCTCTGTAATTACCTCCGATGGACAAAAGATTTGTATTATTGATGATCTTATCGTTCCTGATATT
GCATTGCTTGATGCAACGTGCATTCAACATGTTCCAAAAAATGTTGTGGCTGATACAGGAATCGATGTTCTAGTTCACGC
CATCGAAGCTTACATCTCTACAAAAGCAACAGACTTTACCGACGCCCTAGCTGAGAAATCCATTAAAATTATTTTTGAAG
ATTTAGAAACGGTATACTTAGATATTCATAATACAGCTGCAAGAAGACGAATTTTAAATGCTTCCTGTATTGCTGGTATG
GCATTTTCTAATACAGGTCTTGGAATAAATCACAGTTTAGCCCATGCCTTGGGCTCAGCTTTCAACATCTCCCATGGAAG
AGCAAACGCATTAGTTTTACAAGAAGTTATGAGATATAACGGTGATTTAGATGGTAAAGCTAACAATACTGCTGCTCATA
AATTTTCTAATTTAGCCAAGCAACTATATCTTCCAGCAAGAACCGTTAGAGAAGGTGCTTATCATTTTATTGCTGCCGTA
AAGGAGCTTCAATCTTCTATAAATATAGAAAGAGATCTCAAATCATTTGGTATTGATGAATTAGATTTAAATGCGCAAAT
CTCTTACTTAGCTGAAAATGCTCTGAATGATCGGTGCACACCAACGAATCCTAGAAAAGTCACAATTGAAGATTTAGTAA
GGATTTATCGTAATTGCTATGAGTTATCGTTTTAA

Protein sequence : 
MNQFKIDSMIYFNDDESESLEFLKGIKGEKAFIVADSIMDKLGYLEKTISHLKHAKITCSVFTGVKPDPDTSTISNGIKE
YKKTDADIIIALGGGSAIDTAKAIIYYSAKLSDNHLSKHKPLFIAIPSTSGTGSEVTDFSVITSDGQKICIIDDLIVPDI
ALLDATCIQHVPKNVVADTGIDVLVHAIEAYISTKATDFTDALAEKSIKIIFEDLETVYLDIHNTAARRRILNASCIAGM
AFSNTGLGINHSLAHALGSAFNISHGRANALVLQEVMRYNGDLDGKANNTAAHKFSNLAKQLYLPARTVREGAYHFIAAV
KELQSSINIERDLKSFGIDELDLNAQISYLAENALNDRCTPTNPRKVTIEDLVRIYRNCYELSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42074.1 hypothetical protein Not tested PAI II 536 Protein 4e-67 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amet_3842 YP_001321618.1 iron-containing alcohol dehydrogenase VFG1593 Protein 2e-67 42