Gene Information

Name : Amet_4578 (Amet_4578)
Accession : YP_001322308.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 4692449 - 4692829 bp
Length : 381 bp
Strand : -
Note : PFAM: microcompartments protein; KEGG: chy:CHY_0684 bacterial microcompartments family protein

DNA sequence : 
ATGCAAGCAGCTCTAGGACTAATAGAAACACTAGGATTAACTGCAGCCATTGCGGCCTTAGATGCAGCAGCCAAGGCTGC
CGATGTGACATTAATTGGATACGAAAAAGTAATTGGAGCAGGACAGGGTGTCAGTGTAACGATTCAGATTGCAGGAGATG
TAGCGGCGGTGAAGGCCAGTGTAGAAGCAGGGGTGATCGCTGCAGAAAGAACAGGTAGGGTGCTGGCACATCACGTGATT
CCAAGACCCCATGAAGAAGTCAATGTATTAATTGAAGCCTTCAAAAAGAATGTAAAAAAGAAACAGCAGGCAGAGCCGAA
AAAAGAGGCTCCTAAGAGTAAAAAAAAGCAAGATGTTTCAAGTGACTCTGTGAAGAAATAA

Protein sequence : 
MQAALGLIETLGLTAAIAALDAAAKAADVTLIGYEKVIGAGQGVSVTIQIAGDVAAVKASVEAGVIAAERTGRVLAHHVI
PRPHEEVNVLIEAFKKNVKKKQQAEPKKEAPKSKKKQDVSSDSVKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-11 53
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-10 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amet_4578 YP_001322308.1 microcompartments protein VFG1597 Protein 5e-12 53
Amet_4578 YP_001322308.1 microcompartments protein VFG1598 Protein 6e-11 52