Gene Information

Name : Amet_4580 (Amet_4580)
Accession : YP_001322310.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 4693407 - 4693685 bp
Length : 279 bp
Strand : -
Note : PFAM: microcompartments protein; KEGG: chy:CHY_0682 propanediol utilization protein PduA

DNA sequence : 
ATGAGACAGGCCATAGGTATGGTAGAAGTACGTAGTTTGGTAGCAGCGATCCAGGCAGCCGACACCATGGTCAAAGCGGC
GGATGTACAAATTGTTGACTTGAACTATGTAGGGTCAGGAATTATTTCTGTTGTTGTGACTGGAGAGGTAGCAGCGGTCA
AGGCAGCCGTAGACAGTGGTGAAGAAGCGGCAGGGAGACTTGCGGAAGTGATTTCCACTAATGTCATTGCAAGACCACAT
GAAGAAGTGGATAAATTATTAGATCAAATCATTGGGTAA

Protein sequence : 
MRQAIGMVEVRSLVAAIQAADTMVKAADVQIVDLNYVGSGIISVVVTGEVAAVKAAVDSGEEAAGRLAEVISTNVIARPH
EEVDKLLDQIIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-15 52
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-14 50
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 9e-13 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amet_4580 YP_001322310.1 microcompartments protein VFG1596 Protein 1e-15 52
Amet_4580 YP_001322310.1 microcompartments protein VFG1597 Protein 8e-15 50
Amet_4580 YP_001322310.1 microcompartments protein VFG1598 Protein 4e-13 48