Gene Information

Name : Smed_1620 (Smed_1620)
Accession : YP_001327296.1
Strain : Sinorhizobium medicae WSM419
Genome accession: NC_009636
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1716066 - 1716278 bp
Length : 213 bp
Strand : +
Note : PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sme:SMc04234 putative cold shock-like transcription regulator protein

DNA sequence :
ATGGCCACCAAAGGCATCGTCAAGTTTTTCAACCAGGACAAGGGTTTTGGTTTCATCACGCCGGAAGGCGGTTCGAAGGA
CGTTTTCGTCCACATCACCGCTGTCCAGGCCGCAGGTCTCACCACGTTGAACGATGGCCAGGAGGTCAGCTTCGACACGG
AGCCGGATCGCATGGGCAAGGGCCCGAAGGCCGTCAACCTCCAGGCTCTCTAA

Protein sequence :
MATKGIVKFFNQDKGFGFITPEGGSKDVFVHITAVQAAGLTTLNDGQEVSFDTEPDRMGKGPKAVNLQAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-13 58