Gene Information

Name : Smed_2005 (Smed_2005)
Accession : YP_001327673.1
Strain : Sinorhizobium medicae WSM419
Genome accession: NC_009636
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 2055442 - 2055651 bp
Length : 210 bp
Strand : -
Note : PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sme:SMc01428 probable cold shock transcription regulator protein

DNA sequence :
GTGGCTTCTGGAACGGTAAAGTGGTTCAACAGCACCAAGGGCTTCGGTTTCATCCAGCCAGATGACGGCGCCGCTGACGT
GTTCGTCCATATTTCGGCGGTTGAACGCGCCGGCCTGTCCACGCTGAAAGACGGGCAGAAGGTAAGCTTCGAGCTGACGC
AGGATCGGCGCTCGGGCAAGACCTCGGCGGACAACCTTCGCGCGCTCTGA

Protein sequence :
MASGTVKWFNSTKGFGFIQPDDGAADVFVHISAVERAGLSTLKDGQKVSFELTQDRRSGKTSADNLRAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-11 50