Gene Information

Name : Smed_2329 (Smed_2329)
Accession : YP_001327996.1
Strain : Sinorhizobium medicae WSM419
Genome accession: NC_009636
Putative virulence/resistance : Virulence
Product : TetR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1309
EC number : -
Position : 2410347 - 2410907 bp
Length : 561 bp
Strand : -
Note : PFAM: regulatory protein TetR; KEGG: sme:SMc01522 hypothetical protein

DNA sequence :

ATGACAAACGCCCATTCCAGGAAGAAGCAACCGCAGCGCGTCCGCCGGCAATTGCTGGAGGTCGCAGCTCGGCTGTCACT
CGAGCAGGGAATCGCCGCCTTGACCCTCGATGCCGTGTCGCACGCAGCCGGTGTCAGCAAGGGTGGGCTGTTGCACCATT
TCCCGAACAAGTCGGCCCTGCTCGACGGGCTCTTCGATGATCTCGTTGCGCGCTTCGATAATGCAATCGATGAGGCGATG
GCGAGGGACGAAATCGAAAAAGGACGCTTCACGCGCGCCTATCTCGGCGTCTGTTTCGCACTCGATGCGGAGGCCGAGGC
GCAAGGCTGGCAGGTGCTGACCATCGCGCTCCTTGCTGAACCGCATTTGAAAGCTCGCTGGCGCGAATGGGTGGCGCGCC
GTACGGCGGAATTCGCCGCCACGGACGGTTCGGCCAATTGCCTGCTCGCCCGTTTCGCCGCCGATGGGATCTGGCTGGCG
GATCTGATGGGCAGCCATGACATCGATCGTCCGACGCGGGCGATACTGCTTCAGAGGCTCAACGCGCTTTCGCTGGAGTG
A

Protein sequence :

MTNAHSRKKQPQRVRRQLLEVAARLSLEQGIAALTLDAVSHAAGVSKGGLLHHFPNKSALLDGLFDDLVARFDNAIDEAM
ARDEIEKGRFTRAYLGVCFALDAEAEAQGWQVLTIALLAEPHLKARWREWVARRTAEFAATDGSANCLLARFAADGIWLA
DLMGSHDIDRPTRAILLQRLNALSLE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	CAD42082.1	hypothetical protein	Not tested	PAI II 536	Protein	4e-33	45

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Smed_2329	YP_001327996.1	TetR family transcriptional regulator	VFG1601	Protein	2e-33	45