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Name : Smed_3213 (Smed_3213) Accession : YP_001328872.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Unknown Product : DNA polymerase III subunit epsilon Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0847 EC number : - Position : 3388060 - 3388788 bp Length : 729 bp Strand : + Note : 3'-5' exonuclease of DNA polymerase III DNA sequence : ATGCGTGAAATCATCTTCGATACGGAAACGACCGGTCTCGACAACCGCGAGGACCGGGTCATCGAGATCGGCGGAATCGA GCTCGAGAATCAGTTTCCGACGGGGCGCACGATCCATATCTATATCAATCCGGGCGATCGCAAGGTTCATCCGGAAGCGC TCGCCGTCCACGGCATTACGGATGATTTCCTGAAGGACAAGCCGTCCTTCGCCGAGATAGCACAGGAAATCGTCGATTTC TTCGGCGATGCCCGCTGGGTCGCCCACAACGCGACCTTCGATATGGGCTTCATCAATGCGGAGTTTGAGCGGCTCGGTCT GCCGCCGGTTGGCAGCGACAGGGTGATCGACACGCTATCCCTTGCCCGGCGCAAGCACCCGATGGGGCCGAATTCGCTCG ATGCGCTCTGCCGCCGCTACGGTATCGACAACTCCCATCGAACCAGGCACGGGGCGCTGCTCGACTCCGAACTCCTCGCC GAAGTCTATATTGAGATGATCGGGGGGCGCCAGGCGGCGCTGGGTCTCGTGATGACGGAGACGGGTGGACGGTCGCTCGA AGCCGACGACGGGCCGGTTATCATCGTCGGGAGGGAGCGGCCTTTGCGGCCACGGCTGACGGAGGCCGAAATCGCTGCTC ATGCGGCGCTCGTCTCGAAGATCGGCGCAAATGCAATATGGGCAAAATTCAGCGAAGCTGAAGATATCCTGAGATCGGAA GCCGTTTAG Protein sequence : MREIIFDTETTGLDNREDRVIEIGGIELENQFPTGRTIHIYINPGDRKVHPEALAVHGITDDFLKDKPSFAEIAQEIVDF FGDARWVAHNATFDMGFINAEFERLGLPPVGSDRVIDTLSLARRKHPMGPNSLDALCRRYGIDNSHRTRHGALLDSELLA EVYIEMIGGRQAALGLVMTETGGRSLEADDGPVIIVGRERPLRPRLTEAEIAAHAALVSKIGANAIWAKFSEAEDILRSE AV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaQ | AAO17223.1 | DnaQ | Not tested | tcd island | Protein | 7e-39 | 46 |
