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Name : Smed_0394 (Smed_0394) Accession : YP_001326086.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Unknown Product : D-lactate dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 422685 - 424124 bp Length : 1440 bp Strand : + Note : PFAM: FAD linked oxidase domain protein; KEGG: sme:SMc00832 probable glycolate oxidase subunit protein DNA sequence : ATGCCGGAGACGATAGGCTTTCTGAAGCCCAGGCAGGCTGTTCTCGATCGTCGGCGGGAAATCGTCGCCGACCTCGGTGA TCTGCTTCCGGAAGGTTGCCTCATCAGCGACGAACGTGGCCTCAAGCCATTCGAGACGGATGCATTTATCGCCTACCGGC GGATGCCGCTCGCGGTCGTTCTCCCCGAGACGACGGAACAGGTGGCCACGGTCCTCAAATACTGTAGCCGCTACGGTATT CCAATTGTCCCGAGGGGTGCCGGCACCTCCCTCTCCGGCGGGGCCATTCCTCAGGAAGACGCGATCGTCGTCGGCCTGTC GAAGATGGCGCGCATCCTCGATATCGACCTCTTCAACCGGACGGCGACGGTTCAGGCGGGCGTGACCAATCTCAACATTT CCGACGCGGTTTCGGCCGATGGATTCTTCTATGCGCCGGATCCGAGTTCGCAGCTCGCCTGCACCATCGGCGGGAATATC GGGATGAATTCCGGTGGCGCGCACTGTCTGAAATACGGGGTGACCACAAACAACCTTCTTGGCGTCAAGATGGTGCTTTT CGACGGCACCGTGATCGAACTTGGTGGCAAGGCGCTCGACGCCTCGGGATATGACTTGCTTGGCCTTATCTGTGGTTCCG AGGGGCAGCTTGGTATCGTTACGGAAGCGACGGTGCGGCTGATTGCCAAGGCCGAAGGCGCGCGCCCCGTTCTTTTCGGA TTTGCCACTTCAGAATCCGCCGGGAGCTGCGTCGCCGATATCATCGGATCGGGCATCATTCCGGTTGCGATCGAATTCAT GGACAAACCGGCAATCGAAATCTGCGAAGCCTTCGCGCATGCGGGGTACCCGCTCGACGTCGAAGCATTGCTGATCGTCG AAGTGGAAGGTTCCGAGGCTGAAATGGATTCGATGCTCGCAGGCATCATCGGGATTGCCCGCCGCCACGGTGTGATGACG ATCAAGGAATCGCAATCGGCGCTCGAAGCGGCACTGATCTGGAAGGGGCGGAAATCGGCCTTCGGCGCTACCGGCCGGAT TGCCGATTATATCTGCATGGACGGAACGGTGCCGCTGAGCCAGCTCTCCCATGTCCTGCGCCGGACCGGCGAGATCGTCG CCGGCTATGGCCTGCGCGTTGCCAATGTCTTCCATGCAGGTGACGGCAACATGCATCCGCTGATCCTCTACAATATCAAC GATCCGGATGAAGCGGCCCGGGCGGAAGAGGCGGGCAACGACATTCTGAAGCTCTGCGTCGAGGCAGGCGGCTGCCTCAC CGGGGAACACGGGGTCGGCATCGAGAAACGTGACCTGATGCTGTTTCAGTACAGCAAGGCCGATCTCGACCAGCAGATGG GCGCGCGTGCTGCCTTCGATCCGCAATGGCTCCTGAACCCGTCGAAGGTCTTCCCGCTCGAAGGGCGGCCCGCGGCATGA Protein sequence : MPETIGFLKPRQAVLDRRREIVADLGDLLPEGCLISDERGLKPFETDAFIAYRRMPLAVVLPETTEQVATVLKYCSRYGI PIVPRGAGTSLSGGAIPQEDAIVVGLSKMARILDIDLFNRTATVQAGVTNLNISDAVSADGFFYAPDPSSQLACTIGGNI GMNSGGAHCLKYGVTTNNLLGVKMVLFDGTVIELGGKALDASGYDLLGLICGSEGQLGIVTEATVRLIAKAEGARPVLFG FATSESAGSCVADIIGSGIIPVAIEFMDKPAIEICEAFAHAGYPLDVEALLIVEVEGSEAEMDSMLAGIIGIARRHGVMT IKESQSALEAALIWKGRKSAFGATGRIADYICMDGTVPLSQLSHVLRRTGEIVAGYGLRVANVFHAGDGNMHPLILYNIN DPDEAARAEEAGNDILKLCVEAGGCLTGEHGVGIEKRDLMLFQYSKADLDQQMGARAAFDPQWLLNPSKVFPLEGRPAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 7e-99 | 48 |
