|
Name : rnhA (Smed_0529) Accession : YP_001326220.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 571035 - 571496 bp Length : 462 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGAAACACGTCGACATCTACACGGACGGTGCCTGCTCGGGAAATCCCGGGCCGGGCGGGTGGGGCGCGGTCCTGCGCTA TGGCGACGTGGAAAAGGAGATGTCCGGCGGAGAAGCGGAGACGACGAACAACCGTATGGAACTTCTTGCCGCGATCTCGG CACTGAACGCGCTCAGGCAGCCCTGCGAGGTCGATCTCCATACCGACAGCAAATATGTCATGGACGGCATCTCCAAATGG ATACACGGCTGGAAGCGCAACGGCTGGAAAACCGGCGACAGAAAACCCGTGAAGAACGGCGAATTATGGCAGGCGCTCGA CGCGGCGAGAGACCGCCACAACGTGACCTGGCACTGGGTCAAGGGTCACGCGGGACATCCGGAAAATGAACGGGCGGACG AATTGGCCCGCAAGGGCATGGAACCGTTCAAGAGAGCGCATCGCGCCGATGCGGTGAAATAG Protein sequence : MKHVDIYTDGACSGNPGPGGWGAVLRYGDVEKEMSGGEAETTNNRMELLAAISALNALRQPCEVDLHTDSKYVMDGISKW IHGWKRNGWKTGDRKPVKNGELWQALDAARDRHNVTWHWVKGHAGHPENERADELARKGMEPFKRAHRADAVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 4e-39 | 57 |
