Gene Information

Name : Smed_0634 (Smed_0634)
Accession : YP_001326325.1
Strain : Sinorhizobium medicae WSM419
Genome accession: NC_009636
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmE
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2332
EC number : -
Position : 679510 - 679962 bp
Length : 453 bp
Strand : +
Note : CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocyt

DNA sequence :
ATGACACGCAAGCAGAAACGATTGGCAATCATCGGAGGTGGCGTCGGATTTCTGACGGCGGCGGTCCTGCTCGTCATGTT
CGCTTTTAGCCAGGCGGTCGCCTATTTCTACGTCCCGGGAGATCTTACGAAAGCCGACGTCGCGCCGGGGACGCGTATCC
GCCTCGGCGGGCTTGTCGAGGCAGGCTCCGTCAAACGCGGCGAGGGCAGGACCATTACCTTCAAGGTGACGGATACGCTT
GCGACCGTTCCGGTGACCTATACGGGTATCTTGCCCGACCTCTTCCGCGAGGGGCAGGGCGTCGTGGCCGAGGGTGCCTT
CGTCGGCGGCAGCCCGGTTTTCGTTGCGGACACCGTGCTCGCCAAGCATGATGAGACCTACATGCCGAAGGATGTCGCAG
ATCGCCTCAAGGCCCAGGGGGTCACGCTTGGCGGGGAGGAAAACATCCGATGA

Protein sequence :
MTRKQKRLAIIGGGVGFLTAAVLLVMFAFSQAVAYFYVPGDLTKADVAPGTRIRLGGLVEAGSVKRGEGRTITFKVTDTL
ATVPVTYTGILPDLFREGQGVVAEGAFVGGSPVFVADTVLAKHDETYMPKDVADRLKAQGVTLGGEENIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cycJ / ccmE AAN62107.1 putative cytochrome C-type biogenesis protein CycJ Not tested PAGI-2(C) Protein 1e-24 42