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Name : Smed_0635 (Smed_0635) Accession : YP_001326326.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 679959 - 681941 bp Length : 1983 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: sme:SMc02363 cytochrome C-type biogenesis transmembrane protein DNA sequence : ATGATCATCGAACTCGGGCATTACGCGCTGGTCCTGGCGCTCGCGACCGCGATCATCCAGGGCCTCCTGCCCGTCGTCGG GGTACGGCGCGGCGATCCCGCCTTGATGGCGCTTGCTGCAAACGCGGCGCTCGTCTGCTTTCTGCTGGTCGCATTCTCCT TCGCCGTGCTGACATTCGCTTATGTGACGTCGGATTTCTCGGTCAAGAACGTATGGGAGAACTCGCATTCCCTTAAGCCG CTGATCTACAAGGTCACCGGGGTCTGGGGAAATCACGAAGGCTCCATGCTCCTGTGGCTGCTGATCCTCGTCTTCTTTTC CGCGATGGTCGCTCTCTTCGGCCGAAACCTGCCGGAGACGTTGAAGGCGAATGTGCTTGCGGTGCAGGCCTGGATCGCGA CGGCATTCACACTCTTCGTCCTGCTGACCTCCAATCCCTTTGCGCGGCTGGTGCCGGCGCCTGGAGAGGGCAGGGACTTG AATCCGGTGCTTCAGGATATCGGGCTGGCGATCCACCCGCCCTTGCTCTATCTCGGCTATGTCGGCTTTTCAGTCTGCTT TTCTTTCGCGGTGGCAGCTCTCATCGAGGGGCGGATCGACGCGGCCTGGGCCCGTTGGGTGCGGCCTTGGACGCTCGCCG CCTGGACCTTTCTCACGGCCGGCATCGCAATGGGCTCGTACTGGGCCTATTACGAGCTTGGCTGGGGCGGTTGGTGGTTC TGGGACCCGGTCGAGAATGCCTCCTTCATGCCCTGGCTTGCCGGAACGGCCCTTCTGCACTCGGCGCTGGTCATGGAAAA GCGCGAAGCGCTGAAGATCTGGACCGTGCTGCTGGCGATCACGACCTTCTCGCTGTCGCTGCTCGGGACCTTCCTGGTAC GCTCCGGCGTGCTGACATCGGTCCACGCTTTCGCCACCGACCCGACCCGCGGCGTCTTCATTCTCGCCATTCTGGTGGTC TTCATCGGCGGCGCCTTTTCGCTCTTTGCATTTCGTGCCTCCCACCTCAAAGCCGGGGGGATATTCGCGCCGATCTCGCG CGAGGGCGCCCTTGTCCTGAACAACCTGATCCTGACGACGGCAACCGCGACGGTGCTGACCGGCACTCTCTATCCGCTGG TGCTCGAAGCGCTGACCGGCGACAAGATCTCGGTCGGCGCGCCGTTTTTCAACATGACCTTCGGCCTGCTGATGCTGCCG CTCGTCGCGGTCGTTCCCTTCGGTCCGCTGCTTGCCTGGAAGCGCGGCGACCTCGCCGGCGCGGCGCAGCGGCTGTTTAC GGCTGCTGCCGTAGGCCTGCTTGCCGCCGCAGCCTGCTATTACGCGGTAAATGGCGGCCCGGTGCTGGCTCCACTCGGCC TCGGCCTCGGCGTTTACCTCATCATCGGTGCGCTCACCGACCTTGTCCTGCGCTCCGGACTCGGCAAGGTAAAGGCCGGC GTCGCCTGGAAGCGTTTCTCAGGCCTGCCACGTTCATCTATCGGCACGGCGCTGGCCCATATCGGTCTCGGCATTACCCT GATAGGGATCGTCGCGGTGACAGCCTTCGAGACGGAAACGGTCGTCGAGATGAAACCGGGGGCGGTGGTCGATGTCGGGC GCTACAGCCTGCGTTTCGACGGCATGCGCGAAGGGCGCGGGCCGAACTACACCGAGAATGCCGGCCATTTCACCATCAGC CGCGGCGGCGTCGCCGTCAGTGAGGTCTGGTCGTCGAAGCGGCTCTATTCGGCGCGCCGCATGCCGACGACCGAAGCCGG GATCCGGACCTTCGGCGTGAGCCAGCTCTATGTTTCCCTGGGCGATGACATGGCCGATGGAGGCATCGTCGTGCGCATCT GGTGGAAACCGCTGATCCTGTGCATCTGGGGCGGTGCGCTCGTGATGATGGCCGGCGGAATAGTCTCGCTCACCGACAGG CGTCTTCGCGTGGGCGCACCGGCGCGTGCCAGAAGGCCGCTTGCGGTGGGTGCTGCGGAATGA Protein sequence : MIIELGHYALVLALATAIIQGLLPVVGVRRGDPALMALAANAALVCFLLVAFSFAVLTFAYVTSDFSVKNVWENSHSLKP LIYKVTGVWGNHEGSMLLWLLILVFFSAMVALFGRNLPETLKANVLAVQAWIATAFTLFVLLTSNPFARLVPAPGEGRDL NPVLQDIGLAIHPPLLYLGYVGFSVCFSFAVAALIEGRIDAAWARWVRPWTLAAWTFLTAGIAMGSYWAYYELGWGGWWF WDPVENASFMPWLAGTALLHSALVMEKREALKIWTVLLAITTFSLSLLGTFLVRSGVLTSVHAFATDPTRGVFILAILVV FIGGAFSLFAFRASHLKAGGIFAPISREGALVLNNLILTTATATVLTGTLYPLVLEALTGDKISVGAPFFNMTFGLLMLP LVAVVPFGPLLAWKRGDLAGAAQRLFTAAAVGLLAAAACYYAVNGGPVLAPLGLGLGVYLIIGALTDLVLRSGLGKVKAG VAWKRFSGLPRSSIGTALAHIGLGITLIGIVAVTAFETETVVEMKPGAVVDVGRYSLRFDGMREGRGPNYTENAGHFTIS RGGVAVSEVWSSKRLYSARRMPTTEAGIRTFGVSQLYVSLGDDMADGGIVVRIWWKPLILCIWGGALVMMAGGIVSLTDR RLRVGAPARARRPLAVGAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 8e-102 | 47 |
