Gene Information

Name : Smed_0658 (Smed_0658)
Accession : YP_001326349.1
Strain : Sinorhizobium medicae WSM419
Genome accession: NC_009636
Putative virulence/resistance : Unknown
Product : AMP nucleosidase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0775
EC number : -
Position : 711165 - 712667 bp
Length : 1503 bp
Strand : -
Note : Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile

DNA sequence :
ATGAACAAACGAATCTCTTCGAACGCCGTCCTCTCCGTCGCCACCCCCGATGCCTTCGAGCCGCAGCTCTTCGATGATCC
GGCGGGGGCCGTCGATTGTCTGGAAGCACTTTACGAACGCAATACCCGCTTCCTTTGCCAAGCCTTCGAGGGTCTCGGAA
AAGCCGGCAGGCCACTCACCCGTTTCCGCGCCTGCTATCCGCAGGTCAGCATTGAAACCAGCAGCTTCGGACATGTCGAT
TCGCGGCTTTCCTTCGGCTATGTGAGCGCGCCCGGCGTCTACACGACAACCATTACGCGGCCCAAGCTGTTCCGGCACTA
TCTGAAGGAACAGCTCGGTCATCTGATGCGTAACCACGGCGTTGGCGTGACGGTGTCGGAATCCTCGACACCGATCCCGC
TCCATTTCGCATTCGGCGAAGGAGCGCATGTCGAACCGTCGGCGGCCGAAGGCATCGACATTCCGCTGCGCGACCTTTTC
GACGCACCGGATCTTACGACAACGGACGACGAGATCGCCAACGGCTCCTACGAGCCGGGACCGGGAGAACCGTCGCCGCT
CGCGCCGTTCACGGCGCAACGCATCGACTACTCGCTCGCGCGCCTCAGCCACTATACCGCGACCAGCGCCAGGCACTTCC
AGAACTTCGTGCTCTTCACGAATTATCAGTTCTATGTCGACGAGTTCTGCGCCTGGGCACGCCAGCAGATGGCCGAAGGC
GGCAACGGCTATACCGCCTTCATCGAACCGGGCAATATCACCACTTCGGCCGGCGCTGATCGGCCGGATGCCGACTATTC
TCTCGCCCGTCTGCCGCAGATGCCTGCCTACCATTTGAAGAAGAAGGGACATGGCGGCATCACTCTGGTCAATATCGGCG
TCGGGCCCTCCAATGCCAAGACGATCACAGACCACATAGCCGTGTTGAGACCGCATGTCTGGCTGATGCTCGGCCATTGC
GCGGGGCTTCGCAACAGCCAGCGACTCGGCGATTACGTGCTGGCGCATGCCTATATGCGCGAGGACCATGTGCTCGACGA
CGACCTGCCGGTGTGGATCCCCCTGCCCGCACTGGCCGAGGTGCAGGTTGCGCTTCAGGATGCCGTCGCCGAGGTGACGG
GTTACAAGGGGTACGACCTGAAGCAGATCATGCGCACGGGCACGGTCGCTACGATCGACAACCGCAACTGGGAATTGCGC
GACCAGCGTGGCCCGGTCAAGCGCCTCTCGCAGGCACGAGCCATTGCCCTCGATATGGAATCGGCCACGATAGCGGCCAA
CGGGTTCCGCTTCCGCGTCCCCTACGGGACATTGCTCTGCGTGTCCGACAAGCCGTTGCACGGCGAATTGAAGCTGCCCG
GAATGGCAAGTGCCTTCTATCGAACCCAGGTAAGCCAGCATCTGAAGATCGGCATTCTGGCGCTGCAGAAACTGGCGGCA
ATGCCATCCGAGAAGCTGCATTCACGTAAGCTCAGAAGCTTTTACGAAACCTCGTTCCAGTAG

Protein sequence :
MNKRISSNAVLSVATPDAFEPQLFDDPAGAVDCLEALYERNTRFLCQAFEGLGKAGRPLTRFRACYPQVSIETSSFGHVD
SRLSFGYVSAPGVYTTTITRPKLFRHYLKEQLGHLMRNHGVGVTVSESSTPIPLHFAFGEGAHVEPSAAEGIDIPLRDLF
DAPDLTTTDDEIANGSYEPGPGEPSPLAPFTAQRIDYSLARLSHYTATSARHFQNFVLFTNYQFYVDEFCAWARQQMAEG
GNGYTAFIEPGNITTSAGADRPDADYSLARLPQMPAYHLKKKGHGGITLVNIGVGPSNAKTITDHIAVLRPHVWLMLGHC
AGLRNSQRLGDYVLAHAYMREDHVLDDDLPVWIPLPALAEVQVALQDAVAEVTGYKGYDLKQIMRTGTVATIDNRNWELR
DQRGPVKRLSQARAIALDMESATIAANGFRFRVPYGTLLCVSDKPLHGELKLPGMASAFYRTQVSQHLKIGILALQKLAA
MPSEKLHSRKLRSFYETSFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
amn YP_853085.1 AMP nucleosidase Not tested PAI IV APEC-O1 Protein 2e-92 50